RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 NDUFAF3Q9BU61 184 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 SLC45A2Q9UMX9 530 aa11.11□□□□□ -0.63
ACTB-202ENST00000414620 TMEM189A5PLL7 270 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 PMS2P5A8MQ11 134 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 IFNA21P01568 189 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 IL5P05113 134 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 PRB4P10163 310 aaPredicted RBP11.1□□□□□ -0.63
ACTB-202ENST00000414620 HTN3P15516 51 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 BTCP35070 178 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 C4orf46Q504U0 113 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 SAMD13Q5VXD3 122 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 SLC25A39Q9BZJ4 359 aaPredicted RBP11.1□□□□□ -0.63
ACTB-202ENST00000414620 DKK2Q9UBU2 259 aa11.1□□□□□ -0.63
ACTB-202ENST00000414620 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 LOC102723971A0A1B0GUV8 181 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 HBE1P02100 147 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 METTL15P1P0C7V9 234 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 LINC00869P0C866 280 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 RAP2BP61225 183 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 UHRF2Q96PU4 802 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 NIPSNAP3BQ9BS92 247 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 HIGD1AQ9Y241 93 aa11.09□□□□□ -0.63
ACTB-202ENST00000414620 YTHDF2Q9Y5A9 579 aaKnown RBP11.09□□□□□ -0.63
ACTB-202ENST00000414620 ZNF701M0R085 212 aaPredicted RBP11.08□□□□□ -0.64
ACTB-202ENST00000414620 M0R2Z0 102 aa11.08□□□□□ -0.64
ACTB-202ENST00000414620 OR5G3P0C626 314 aa11.08□□□□□ -0.64
ACTB-202ENST00000414620 CNN1P51911 297 aaKnown RBP11.08□□□□□ -0.64
ACTB-202ENST00000414620 RRN3P1Q2M238 152 aa11.08□□□□□ -0.64
ACTB-202ENST00000414620 IAH1Q2TAA2 248 aaPredicted RBP11.08□□□□□ -0.64
ACTB-202ENST00000414620 AMTNQ6UX39 209 aa11.08□□□□□ -0.64
ACTB-202ENST00000414620 ZNF738Q8NE65 137 aa11.08□□□□□ -0.64
ACTB-202ENST00000414620 GPR82Q96P67 336 aa11.08□□□□□ -0.64
ACTB-202ENST00000414620 SHANK2-AS3Q9BTD1 123 aa11.08□□□□□ -0.64
ACTB-202ENST00000414620 TMEM208Q9BTX3 173 aa11.08□□□□□ -0.64
ACTB-202ENST00000414620 NACAE9PAV3 2078 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 CENPXA8MT69 81 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 HYPMO75409 117 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 PRM2P04554 102 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 P0DMU3 169 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 FAM231AP0DMU4 169 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 FAM231CP0DMU5 169 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 S100A7P31151 101 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 DLK1P80370 383 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 SLC38A11Q08AI6 406 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 TMEM14EPQ6UXP3 125 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 POM121L12Q8N7R1 296 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 OR11H7Q8NGC8 314 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 SMIM8Q96KF7 97 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 GSKIPQ9P0R6 139 aa11.07□□□□□ -0.64
ACTB-202ENST00000414620 A8MTW9 85 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 M0R2N4 97 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 CCSO14618 274 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 IL7P13232 177 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 UBE2DNLQ8IWF7 75 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 BAP18Q8IXM2 172 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 ZBTB8BQ8NAP8 495 aaPredicted RBP11.06□□□□□ -0.64
ACTB-202ENST00000414620 IGF2BP2-AS1Q96M15 143 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 ARL6Q9H0F7 186 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 MGAT4CQ9UBM8 478 aa11.06□□□□□ -0.64
ACTB-202ENST00000414620 RCL1Q9Y2P8 373 aaKnown RBP11.06□□□□□ -0.64
ACTB-202ENST00000414620 TRAV12-2A0A075B6T6 113 aa11.05□□□□□ -0.64
ACTB-202ENST00000414620 TEX48A0A1B0GUV7 120 aa11.05□□□□□ -0.64
ACTB-202ENST00000414620 ZNF705GA8MUZ8 300 aaPredicted RBP11.05□□□□□ -0.64
ACTB-202ENST00000414620 DUSP14O95147 198 aaKnown RBP11.05□□□□□ -0.64
ACTB-202ENST00000414620 INSP01308 110 aa11.05□□□□□ -0.64
ACTB-202ENST00000414620 RPL7P18124 248 aaKnown RBP11.05□□□□□ -0.64
ACTB-202ENST00000414620 OR10P1Q8NGE3 313 aa11.05□□□□□ -0.64
ACTB-202ENST00000414620 C20orf85Q9H1P6 137 aa11.05□□□□□ -0.64
ACTB-202ENST00000414620 CRXO43186 299 aaPredicted RBP11.04□□□□□ -0.64
ACTB-202ENST00000414620 SNRPCP09234 159 aaKnown RBP11.04□□□□□ -0.64
ACTB-202ENST00000414620 PLP1P60201 277 aa11.04□□□□□ -0.64
ACTB-202ENST00000414620 DAD1P61803 113 aa11.04□□□□□ -0.64
ACTB-202ENST00000414620 SELENOTP62341 195 aa11.04□□□□□ -0.64
ACTB-202ENST00000414620 HIST1H1AQ02539 215 aaPredicted RBP11.04□□□□□ -0.64
ACTB-202ENST00000414620 ARL16Q0P5N6 197 aa11.04□□□□□ -0.64
ACTB-202ENST00000414620 PATE2Q6UY27 113 aa11.04□□□□□ -0.64
ACTB-202ENST00000414620 ARV1Q9H2C2 271 aa11.04□□□□□ -0.64
ACTB-202ENST00000414620 NPVFQ9HCQ7 196 aa11.04□□□□□ -0.64
ACTB-202ENST00000414620 IGLV2-18A0A075B6J9 118 aa11.03□□□□□ -0.64
ACTB-202ENST00000414620 BOLA2-SMG1P6H3BVE0 249 aa11.03□□□□□ -0.64
ACTB-202ENST00000414620 TSC22D2O75157 780 aa11.03□□□□□ -0.64
ACTB-202ENST00000414620 MBPP02686 304 aaPredicted RBP11.03□□□□□ -0.64
ACTB-202ENST00000414620 RHOBP62745 196 aa11.03□□□□□ -0.64
ACTB-202ENST00000414620 TEPPQ6URK8 271 aa11.03□□□□□ -0.64
ACTB-202ENST00000414620 LRRC20Q8TCA0 184 aa11.03□□□□□ -0.64
ACTB-202ENST00000414620 MITD1Q8WV92 249 aa11.03□□□□□ -0.64
ACTB-202ENST00000414620 LSM5Q9Y4Y9 91 aaKnown RBP11.03□□□□□ -0.64
ACTB-202ENST00000414620 TRAV6A0A075B6T7 132 aa11.02□□□□□ -0.65
ACTB-202ENST00000414620 A0A087X0K7 114 aa11.02□□□□□ -0.65
ACTB-202ENST00000414620 FAM25EA8MYX2 175 aa11.02□□□□□ -0.65
ACTB-202ENST00000414620 PLA2G10O15496 165 aa11.02□□□□□ -0.65
ACTB-202ENST00000414620 CXCL3P19876 107 aa11.02□□□□□ -0.65
ACTB-202ENST00000414620 TMEM88Q6PEY1 159 aa11.02□□□□□ -0.65
ACTB-202ENST00000414620 PPP1R14DQ9NXH3 145 aa11.02□□□□□ -0.65
ACTB-202ENST00000414620 C7orf66A4D0T2 115 aa11.01□□□□□ -0.65
ACTB-202ENST00000414620 FNDC10F2Z333 226 aa11.01□□□□□ -0.65
ACTB-202ENST00000414620 H3BTX0 84 aa11.01□□□□□ -0.65
ACTB-202ENST00000414620 L7N2F9 121 aa11.01□□□□□ -0.65
ACTB-202ENST00000414620 GOSR2O14653 212 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms