RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 SCARB1Q8WTV0 552 aa6.9□□□□□ -1.3
RFFL-203ENST00000413582 ARL6Q9H0F7 186 aa6.9□□□□□ -1.3
RFFL-203ENST00000413582 CELA1Q9UNI1 258 aa6.9□□□□□ -1.3
RFFL-203ENST00000413582 F11RQ9Y624 299 aaKnown RBP6.9□□□□□ -1.3
RFFL-203ENST00000413582 X6R8D5 127 aa6.9□□□□□ -1.3
RFFL-203ENST00000413582 NACAE9PAV3 2078 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 IGHV3OR16-13A0A075B7E8 117 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 IGHV3-74A0A0B4J1X5 117 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 KANTRA0A1W2PQU2 76 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 IGSF23A1L1A6 192 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 PMS2P5A8MQ11 134 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 ZNF705EA8MWA4 302 aaPredicted RBP6.89□□□□□ -1.31
RFFL-203ENST00000413582 DFFBO76075 338 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 CTSGP08311 255 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 RNASE2P10153 161 aaKnown RBP6.89□□□□□ -1.31
RFFL-203ENST00000413582 GPX4P36969 197 aaPredicted RBP6.89□□□□□ -1.31
RFFL-203ENST00000413582 NKX2-5P52952 324 aaPredicted RBP6.89□□□□□ -1.31
RFFL-203ENST00000413582 DEFB131AP59861 70 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 ZNF266Q14584 549 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 OPCMLQ14982 345 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 C21orf62-AS1Q17RA5 79 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 Q56UQ5 140 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 LEMD1Q68G75 181 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 SLC25A24Q6NUK1 477 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 Q6ZR54 194 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 SLC51BQ86UW2 128 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 FAM24BQ8N5W8 94 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 UBAC2Q8NBM4 344 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 OR1S2Q8NGQ3 325 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 ARPC5LQ9BPX5 153 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 SCRT1Q9BWW7 348 aa6.89□□□□□ -1.31
RFFL-203ENST00000413582 PARD6GQ9BYG4 376 aaPredicted RBP6.89□□□□□ -1.31
RFFL-203ENST00000413582 HERC1Q15751 4861 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 BORCS7-ASMTA0A0B4J1R7 106 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 NUPL2O15504 423 aaKnown RBP6.88□□□□□ -1.31
RFFL-203ENST00000413582 BCL2L11O43521 198 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 METTL15P1P0C7V9 234 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 DLK1P80370 383 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 NHLH2Q02577 135 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 RELQ04864 619 aaPredicted RBP6.88□□□□□ -1.31
RFFL-203ENST00000413582 ETFRF1Q6IPR1 90 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 TCF24Q7RTU0 167 aa6.88□□□□□ -1.31
RFFL-203ENST00000413582 TRPT1Q86TN4 253 aaKnown RBP6.88□□□□□ -1.31
RFFL-203ENST00000413582 TRAV2A0A0B4J234 112 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 RPS10-NUDT3A0A1W2PQS6 291 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 PRSS46E5RG02 174 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 H3BP45 60 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 CDK2AP2O75956 126 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 CST7O76096 145 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 SMCPP49901 116 aaPredicted RBP6.87□□□□□ -1.31
RFFL-203ENST00000413582 SLC38A11Q08AI6 406 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 VWC2Q2TAL6 325 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 C12orf74Q32Q52 190 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 TMEM41BQ5BJD5 291 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 ZNF767PQ75MW2 155 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 STHQ8IWL8 128 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 MAPKAPK5-AS1Q8N8E1 139 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 OR5C1Q8NGR4 320 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 STOML3Q8TAV4 291 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 TMEM170AQ8WVE7 144 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 ST8SIA2Q92186 375 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 ATP5SQ99766 215 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 NDUFAF3Q9BU61 184 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 MS4A6AQ9H2W1 248 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 VSIRQ9H7M9 311 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 LRP1BQ9NZR2 4599 aa6.87□□□□□ -1.31
RFFL-203ENST00000413582 DMBT1Q9UGM3 2413 aaPredicted RBP6.86□□□□□ -1.31
RFFL-203ENST00000413582 IGLV2-18A0A075B6J9 118 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 MPDU1O75352 247 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 YIF1AO95070 293 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 IFNA5P01569 189 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 CD5P06127 495 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 SPP1P10451 314 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 PAFAH1B2P68402 229 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 ARL16Q0P5N6 197 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 OR8G2PQ6IF36 304 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 EIF5AL1Q6IS14 154 aaKnown RBP6.86□□□□□ -1.31
RFFL-203ENST00000413582 PHYHIPLQ96FC7 376 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 TMEM147Q9BVK8 224 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 ARV1Q9H2C2 271 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 NPVFQ9HCQ7 196 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 CYTL1Q9NRR1 136 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 UQCC1Q9NVA1 299 aa6.86□□□□□ -1.31
RFFL-203ENST00000413582 PAIP2BQ9ULR5 123 aaKnown RBP6.86□□□□□ -1.31
RFFL-203ENST00000413582 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
RFFL-203ENST00000413582 I3L2K1 104 aa6.85□□□□□ -1.31
RFFL-203ENST00000413582 DNASE2O00115 360 aaPredicted RBP6.85□□□□□ -1.31
RFFL-203ENST00000413582 APOHP02749 345 aaPredicted RBP6.85□□□□□ -1.31
RFFL-203ENST00000413582 TPT1P13693 172 aaKnown RBP6.85□□□□□ -1.31
RFFL-203ENST00000413582 SOHLH1Q5JUK2 328 aa6.85□□□□□ -1.31
RFFL-203ENST00000413582 MORN3Q6PF18 240 aaPredicted RBP6.85□□□□□ -1.31
RFFL-203ENST00000413582 TMEM144Q7Z5S9 345 aa6.85□□□□□ -1.31
RFFL-203ENST00000413582 BAP18Q8IXM2 172 aa6.85□□□□□ -1.31
RFFL-203ENST00000413582 CSNK1G2-AS1Q8NCQ2 148 aa6.85□□□□□ -1.31
RFFL-203ENST00000413582 ZNF471Q9BX82 626 aaPredicted RBP6.85□□□□□ -1.31
RFFL-203ENST00000413582 CLEC5AQ9NY25 188 aa6.85□□□□□ -1.31
RFFL-203ENST00000413582 IGHV3-66A0A0C4DH42 116 aa6.84□□□□□ -1.31
RFFL-203ENST00000413582 KNCNA6PVL3 124 aa6.84□□□□□ -1.31
RFFL-203ENST00000413582 SEC11BP0C7V7 166 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms