RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 CFHR2P36980 270 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 C15orf32Q32M92 178 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 ARL6IP6Q8N6S5 226 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 TRBV9A0A0B4J1U6 114 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 FAM106AQ4KMX7 169 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 C2orf83Q53S99 150 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 C10orf91Q5T1B1 145 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 LYRM7Q5U5X0 104 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 NIT1Q86X76 327 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 TMEM256Q8N2U0 113 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 AP5S1Q9NUS5 200 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 C5orf64Q2M2E5 130 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 IGF2-ASQ6U949 168 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 TNFRSF14Q92956 283 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 ALKBH7Q9BT30 221 aaPredicted RBP9.05□□□□□ -0.96
PTPRF-204ENST00000412568 TMEM242Q9NWH2 141 aa9.05□□□□□ -0.96
PTPRF-204ENST00000412568 MTORP42345 2549 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 TRAV8-1A0A0A6YYK1 113 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 C22orf46C9J442 243 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 TCF24Q7RTU0 167 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 OR10J6PQ8NGY7 276 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 Q6ZPA2 131 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 LURAP1LQ8IV03 231 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 Q8TCH9 128 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 VPS13AQ96RL7 3174 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 NUTF2P61970 127 aaKnown RBP9.04□□□□□ -0.96
PTPRF-204ENST00000412568 ZNF664Q8N3J9 261 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 OR10AG1Q8NH19 301 aa9.04□□□□□ -0.96
PTPRF-204ENST00000412568 SSBP4Q9BWG4 385 aaPredicted RBP9.04□□□□□ -0.96
PTPRF-204ENST00000412568 ZNF462Q96JM2 2506 aa9.03□□□□□ -0.96
PTPRF-204ENST00000412568 PRTN3P24158 256 aa9.03□□□□□ -0.96
PTPRF-204ENST00000412568 PPIFP30405 207 aaKnown RBP9.03□□□□□ -0.96
PTPRF-204ENST00000412568 RBPMS2Q6ZRY4 209 aaKnown RBP9.03□□□□□ -0.96
PTPRF-204ENST00000412568 NRGNQ92686 78 aa9.03□□□□□ -0.96
PTPRF-204ENST00000412568 A0A1W2PRE2 83 aa9.03□□□□□ -0.96
PTPRF-204ENST00000412568 NDPQ00604 133 aa9.03□□□□□ -0.96
PTPRF-204ENST00000412568 A0A1W2PS18 150 aa9.03□□□□□ -0.96
PTPRF-204ENST00000412568 LRP4O75096 1905 aa9.03□□□□□ -0.96
PTPRF-204ENST00000412568 H7C2G1 150 aa9.02□□□□□ -0.96
PTPRF-204ENST00000412568 GPX1P07203 203 aa9.02□□□□□ -0.96
PTPRF-204ENST00000412568 UTF1Q5T230 341 aa9.02□□□□□ -0.96
PTPRF-204ENST00000412568 C18orf15Q96N68 181 aa9.02□□□□□ -0.96
PTPRF-204ENST00000412568 PEF1Q9UBV8 284 aaKnown RBP9.02□□□□□ -0.96
PTPRF-204ENST00000412568 TDGF1P3P51864 188 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 WT1-ASQ06250 92 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 TEX36Q5VZQ5 186 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 KLK15Q9H2R5 256 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 M0R3E3 92 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 DLEU1O43261 78 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 HBBP68871 147 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 LDLRAD2Q5SZI1 272 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 ASPHD1Q5U4P2 390 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 YAE1D1Q9NRH1 226 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 C7orf71A4D174 169 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 G3V318 75 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 NPFFO15130 113 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 GZMBP10144 247 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 PLA2G5P39877 138 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 ADORA2A-AS1P86434 159 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 DNLZQ5SXM8 178 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 SP5Q6BEB4 398 aaPredicted RBP9.02□□□□□ -0.97
PTPRF-204ENST00000412568 GPR82Q96P67 336 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 TMEM14BQ9NUH8 114 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 EPDR1Q9UM22 224 aa9.02□□□□□ -0.97
PTPRF-204ENST00000412568 HIGD1CA8MV81 97 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 VDAC2P45880 294 aaPredicted RBP9.01□□□□□ -0.97
PTPRF-204ENST00000412568 DNAH14Q0VDD8 3507 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 ID1P41134 155 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 EBLN2Q6P2I7 272 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 OR5AN1Q8NGI8 311 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 LYPD6BQ8NI32 183 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 HIST1H4GQ99525 98 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 EREGO14944 169 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 FAM74A4Q5TZK3 123 aa9.01□□□□□ -0.97
PTPRF-204ENST00000412568 NUP210LQ5VU65 1888 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 M0R381 172 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 HERVK_113P61574 105 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 TMEM136Q6ZRR5 245 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 TRAV8-6A0A0B4J262 113 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 PSG9Q00887 426 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 LAMA1P25391 3075 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 PKD1L2Q7Z442 2459 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 A0A1B0GWJ7 208 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 ZNF324O75467 553 aaPredicted RBP9□□□□□ -0.97
PTPRF-204ENST00000412568 LHBP01229 141 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 C3orf36Q3SXR2 165 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 SMIM12Q96EX1 92 aa9□□□□□ -0.97
PTPRF-204ENST00000412568 C1orf194Q5T5A4 169 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 DGAT2L7PQ6IED9 249 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 SLC25A39Q9BZJ4 359 aaPredicted RBP8.99□□□□□ -0.97
PTPRF-204ENST00000412568 OSTCQ9NRP0 149 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 KIAA1549Q9HCM3 1950 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 TRAV41A0A0B4J266 112 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 NPIPB5A8MRT5 1133 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 B4DSR2 109 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 C9JCJ5 164 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 APOHP02749 345 aaPredicted RBP8.99□□□□□ -0.97
PTPRF-204ENST00000412568 Q5PR19 223 aa8.99□□□□□ -0.97
PTPRF-204ENST00000412568 LCN12Q6JVE5 192 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms