RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 DEFB131AP59861 70 aa10.35□□□□□ -0.75
CPNE1-206ENST00000412056 C10orf113Q5VZT2 155 aa10.35□□□□□ -0.75
CPNE1-206ENST00000412056 LINC00322Q6ZN03 302 aaPredicted RBP10.35□□□□□ -0.75
CPNE1-206ENST00000412056 LINC00305Q7Z4B0 112 aa10.35□□□□□ -0.75
CPNE1-206ENST00000412056 hCG_2014768A0A024R1R8 64 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 ELOA3CA0A087WX78 387 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-206ENST00000412056 GALR1P47211 349 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 CMC4P56277 68 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-206ENST00000412056 GCSAMLQ5JQS6 135 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 ZNF709Q8N972 641 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 OR1L4Q8NGR5 311 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 SCGB1C1Q8TD33 95 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 GPR82Q96P67 336 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 PARD6GQ9BYG4 376 aaPredicted RBP10.34□□□□□ -0.75
CPNE1-206ENST00000412056 DNAJC4Q9NNZ3 241 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 RFNGQ9Y644 331 aa10.34□□□□□ -0.75
CPNE1-206ENST00000412056 C17orf112F2Z3M2 114 aa10.33□□□□□ -0.76
CPNE1-206ENST00000412056 SOCS3O14543 225 aa10.33□□□□□ -0.76
CPNE1-206ENST00000412056 RPL7P18124 248 aaKnown RBP10.33□□□□□ -0.76
CPNE1-206ENST00000412056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.33□□□□□ -0.76
CPNE1-206ENST00000412056 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
CPNE1-206ENST00000412056 INO80EQ8NBZ0 244 aaPredicted RBP10.33□□□□□ -0.76
CPNE1-206ENST00000412056 PFDN5Q99471 154 aa10.33□□□□□ -0.76
CPNE1-206ENST00000412056 KCNIP2Q9NS61 270 aa10.33□□□□□ -0.76
CPNE1-206ENST00000412056 PRKDCP78527 4128 aaKnown RBP10.33□□□□□ -0.76
CPNE1-206ENST00000412056 MRPS12O15235 138 aaKnown RBP10.32□□□□□ -0.76
CPNE1-206ENST00000412056 ARPC5O15511 151 aa10.32□□□□□ -0.76
CPNE1-206ENST00000412056 ATF4P18848 351 aaPredicted RBP10.32□□□□□ -0.76
CPNE1-206ENST00000412056 HAGHQ16775 308 aa10.32□□□□□ -0.76
CPNE1-206ENST00000412056 PSMG4Q5JS54 123 aa10.32□□□□□ -0.76
CPNE1-206ENST00000412056 GATAD1Q8WUU5 269 aa10.32□□□□□ -0.76
CPNE1-206ENST00000412056 ST6GAL2Q96JF0 529 aa10.32□□□□□ -0.76
CPNE1-206ENST00000412056 LOC102724200A0A096LPH7 203 aaPredicted RBP10.31□□□□□ -0.76
CPNE1-206ENST00000412056 TRAV5A0A0B4J249 113 aa10.31□□□□□ -0.76
CPNE1-206ENST00000412056 RPL35AP18077 110 aaKnown RBP10.31□□□□□ -0.76
CPNE1-206ENST00000412056 MEOX2P50222 304 aa10.31□□□□□ -0.76
CPNE1-206ENST00000412056 ZNF266Q14584 549 aa10.31□□□□□ -0.76
CPNE1-206ENST00000412056 FFAR4Q5NUL3 377 aa10.31□□□□□ -0.76
CPNE1-206ENST00000412056 OR11H4Q8NGC9 324 aa10.31□□□□□ -0.76
CPNE1-206ENST00000412056 A0A087X0K7 114 aa10.3□□□□□ -0.76
CPNE1-206ENST00000412056 KNCNA6PVL3 124 aa10.3□□□□□ -0.76
CPNE1-206ENST00000412056 PSMB3P49720 205 aa10.3□□□□□ -0.76
CPNE1-206ENST00000412056 SNRPD3P62318 126 aaKnown RBP10.3□□□□□ -0.76
CPNE1-206ENST00000412056 FAM78BQ5VT40 261 aa10.3□□□□□ -0.76
CPNE1-206ENST00000412056 SPATA31B1PQ5VZV4 182 aa10.3□□□□□ -0.76
CPNE1-206ENST00000412056 HSD17B11Q8NBQ5 300 aa10.3□□□□□ -0.76
CPNE1-206ENST00000412056 MFFQ9GZY8 342 aa10.3□□□□□ -0.76
CPNE1-206ENST00000412056 SEPSECSQ9HD40 501 aaKnown RBP10.3□□□□□ -0.76
CPNE1-206ENST00000412056 RNF24Q9Y225 148 aa10.3□□□□□ -0.76
CPNE1-206ENST00000412056 ISLRO14498 428 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 SNRPCP09234 159 aaKnown RBP10.29□□□□□ -0.76
CPNE1-206ENST00000412056 ID1P41134 155 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 DEFB1P60022 68 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 RPL7L1Q6DKI1 246 aaKnown RBP10.29□□□□□ -0.76
CPNE1-206ENST00000412056 MIR17HGQ75NE6 70 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 BPIFA4PQ86YQ2 179 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 C16orf92Q96LL3 132 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 C20orf173Q96LM9 149 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 LINC00052Q96N35 136 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 TM2D3Q9BRN9 247 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 RETNQ9HD89 108 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 TIMM9Q9Y5J7 89 aa10.29□□□□□ -0.76
CPNE1-206ENST00000412056 TRAV8-2A0A0B4J237 113 aa10.28□□□□□ -0.76
CPNE1-206ENST00000412056 A0A1B0GVG6 124 aa10.28□□□□□ -0.76
CPNE1-206ENST00000412056 H3BTX0 84 aa10.28□□□□□ -0.76
CPNE1-206ENST00000412056 NHLRC4P0CG21 123 aaPredicted RBP10.28□□□□□ -0.76
CPNE1-206ENST00000412056 ATP6V0CP27449 155 aa10.28□□□□□ -0.76
CPNE1-206ENST00000412056 ACTL10Q5JWF8 245 aa10.28□□□□□ -0.76
CPNE1-206ENST00000412056 SAMD13Q5VXD3 122 aa10.28□□□□□ -0.76
CPNE1-206ENST00000412056 IGFL4Q6B9Z1 124 aa10.28□□□□□ -0.76
CPNE1-206ENST00000412056 SLC25A2Q9BXI2 301 aa10.28□□□□□ -0.76
CPNE1-206ENST00000412056 BORCS7-ASMTA0A0B4J1R7 106 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 HMSDA8MTL9 139 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 H3BQ15 152 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 IGLC2P0DOY2 106 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 HLA-DMBP28068 263 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 RAB2AP61019 212 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 STHQ8IWL8 128 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 RNF182Q8N6D2 247 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 FAM167A-AS1Q96KT0 104 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 MRPL32Q9BYC8 188 aaKnown RBP10.27□□□□□ -0.77
CPNE1-206ENST00000412056 SH3BGRL3Q9H299 93 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 FUT9Q9Y231 359 aa10.27□□□□□ -0.77
CPNE1-206ENST00000412056 SLC17A3O00476 420 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 PYYP10082 97 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 CXCL2P19875 107 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 APOC4P55056 127 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 ZNF345Q14585 488 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 ACOT6Q3I5F7 207 aaPredicted RBP10.26□□□□□ -0.77
CPNE1-206ENST00000412056 GDF5OSQ5U4N7 250 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 LCN15Q6UWW0 184 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 TRPT1Q86TN4 253 aaKnown RBP10.26□□□□□ -0.77
CPNE1-206ENST00000412056 TCTE3Q8IZS6 198 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 KCNRGQ8N5I3 272 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 SPATA25Q9BR10 227 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 PSMG3Q9BT73 122 aaPredicted RBP10.26□□□□□ -0.77
CPNE1-206ENST00000412056 ZMAT4Q9H898 229 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 CYTL1Q9NRR1 136 aa10.26□□□□□ -0.77
CPNE1-206ENST00000412056 ZNF586Q9NXT0 402 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms