RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 Q8WTZ3 238 aa13.88□□□□□ -0.19
CXXC1-202ENST00000412036 SHANK2-AS3Q9BTD1 123 aa13.88□□□□□ -0.19
CXXC1-202ENST00000412036 PAXXQ9BUH6 204 aa13.88□□□□□ -0.19
CXXC1-202ENST00000412036 OR51M1Q9H341 326 aa13.88□□□□□ -0.19
CXXC1-202ENST00000412036 MANBALQ9NQG1 85 aa13.88□□□□□ -0.19
CXXC1-202ENST00000412036 BMPR1BO00238 502 aa13.87□□□□□ -0.19
CXXC1-202ENST00000412036 RBMS3Q6XE24 437 aaKnown RBP13.87□□□□□ -0.19
CXXC1-202ENST00000412036 PQLC2Q6ZP29 291 aa13.87□□□□□ -0.19
CXXC1-202ENST00000412036 IGHV3-49A0A0A0MS15 119 aa13.87□□□□□ -0.19
CXXC1-202ENST00000412036 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.87□□□□□ -0.19
CXXC1-202ENST00000412036 IGHV3-66A0A0C4DH42 116 aa13.87□□□□□ -0.19
CXXC1-202ENST00000412036 ZNF98A6NK75 572 aa13.87□□□□□ -0.19
CXXC1-202ENST00000412036 HNF1AP20823 631 aa13.87□□□□□ -0.19
CXXC1-202ENST00000412036 TEX29Q8N6K0 151 aa13.87□□□□□ -0.19
CXXC1-202ENST00000412036 SCO2A0A1W2PP80 73 aa13.86□□□□□ -0.19
CXXC1-202ENST00000412036 ZNF600Q6ZNG1 722 aa13.86□□□□□ -0.19
CXXC1-202ENST00000412036 BLNKQ8WV28 456 aa13.86□□□□□ -0.19
CXXC1-202ENST00000412036 TUBA4BQ9H853 241 aa13.86□□□□□ -0.19
CXXC1-202ENST00000412036 ZNF586Q9NXT0 402 aa13.86□□□□□ -0.19
CXXC1-202ENST00000412036 C2CD3Q4AC94 2353 aa13.86□□□□□ -0.19
CXXC1-202ENST00000412036 ARL3P36405 182 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 TAS2R45P59539 299 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 SNRPEP62304 92 aaKnown RBP13.85□□□□□ -0.19
CXXC1-202ENST00000412036 MYOZ3Q8TDC0 251 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 SELENOKQ9Y6D0 94 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 MT-ND4LP03901 98 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 SOHLH1Q5JUK2 328 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 FAM24BQ8N5W8 94 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 RPUSD4Q96CM3 377 aaKnown RBP13.85□□□□□ -0.19
CXXC1-202ENST00000412036 USMG5Q96IX5 58 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 RNF2Q99496 336 aa13.85□□□□□ -0.19
CXXC1-202ENST00000412036 IFNA1P01562 189 aa13.84□□□□□ -0.19
CXXC1-202ENST00000412036 SMDT1Q9H4I9 107 aa13.84□□□□□ -0.19
CXXC1-202ENST00000412036 SMAD5-AS1Q9Y6J3 95 aa13.84□□□□□ -0.19
CXXC1-202ENST00000412036 HILS1P60008 231 aa13.84□□□□□ -0.19
CXXC1-202ENST00000412036 RNF212Q495C1 297 aa13.84□□□□□ -0.19
CXXC1-202ENST00000412036 ELOVL1Q9BW60 279 aa13.84□□□□□ -0.19
CXXC1-202ENST00000412036 TENM1Q9UKZ4 2725 aa13.83□□□□□ -0.19
CXXC1-202ENST00000412036 JMJD1CQ15652 2540 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 TRBV20OR9-2A0A075B6H5 130 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 SLC17A3O00476 420 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 NDUFB4O95168 129 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 RAB5BP61020 215 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 C12orf57Q99622 126 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 PARLQ9H300 379 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 CDC42EP3Q9UKI2 254 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 PGPEP1LA6NFU8 196 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 CLDN34H7C241 214 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 RNASE1P07998 156 aaKnown RBP13.83□□□□□ -0.2
CXXC1-202ENST00000412036 IGLC2P0DOY2 106 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 MYCNOSP40205 109 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 RHEBQ15382 184 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 ZNF674Q2M3X9 581 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 TEX38Q6PEX7 206 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 KLHDC1Q8N7A1 406 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 WIPF2Q8TF74 440 aaPredicted RBP13.83□□□□□ -0.2
CXXC1-202ENST00000412036 TMEM167BQ9NRX6 74 aa13.83□□□□□ -0.2
CXXC1-202ENST00000412036 C1orf196B1AJZ1 125 aa13.82□□□□□ -0.2
CXXC1-202ENST00000412036 FABP1P07148 127 aa13.82□□□□□ -0.2
CXXC1-202ENST00000412036 RANP62826 216 aaKnown RBP13.82□□□□□ -0.2
CXXC1-202ENST00000412036 SUMO1P63165 101 aaKnown RBP13.82□□□□□ -0.2
CXXC1-202ENST00000412036 LINC00479Q96M42 142 aa13.82□□□□□ -0.2
CXXC1-202ENST00000412036 YPEL4Q96NS1 127 aa13.82□□□□□ -0.2
CXXC1-202ENST00000412036 NBEAP1P0C6P0 100 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 RAB5AP20339 215 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 GNG5P63218 68 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 AURKAIP1Q9NWT8 199 aaPredicted RBP13.81□□□□□ -0.2
CXXC1-202ENST00000412036 C5orf52A6NGY3 159 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 ZNF727A8MUV8 499 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 FOXE3Q13461 319 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 DEFB136Q30KP8 78 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 RNF152Q8N8N0 203 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 C11orf44Q8N8P7 122 aa13.81□□□□□ -0.2
CXXC1-202ENST00000412036 CRYBB3P26998 211 aa13.8□□□□□ -0.2
CXXC1-202ENST00000412036 EXOC3-AS1Q8N2X6 119 aa13.8□□□□□ -0.2
CXXC1-202ENST00000412036 RABAC1Q9UI14 185 aa13.8□□□□□ -0.2
CXXC1-202ENST00000412036 BUB3O43684 328 aa13.8□□□□□ -0.2
CXXC1-202ENST00000412036 TMEM14CQ9P0S9 112 aa13.8□□□□□ -0.2
CXXC1-202ENST00000412036 A0A0G2JLM5 398 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 TMEM250H0YL14 139 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 IGFL4Q6B9Z1 124 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 LINC01006Q8NI28 216 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 A0A1W2PRE2 83 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 ELANEP08246 267 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 DUX3Q96PT4 197 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 ATP6V0BQ99437 205 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 PEF1Q9UBV8 284 aaKnown RBP13.79□□□□□ -0.2
CXXC1-202ENST00000412036 U3KQE9 123 aa13.79□□□□□ -0.2
CXXC1-202ENST00000412036 IGHV4OR15-8A0A075B7B6 117 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 A0A087WW49 117 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 MEOX2P50222 304 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 TM4SF20Q53R12 229 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 SMIM7Q9BQ49 75 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 GAR1Q9NY12 217 aaKnown RBP13.78□□□□□ -0.2
CXXC1-202ENST00000412036 TRBV19A0A075B6N1 114 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 TMEM89A2RUT3 159 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 SLC35B1P78383 322 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 SGK494Q96LW2 274 aa13.78□□□□□ -0.2
CXXC1-202ENST00000412036 HIST1H1EP10412 219 aaKnown RBP13.77□□□□□ -0.21
CXXC1-202ENST00000412036 HLA-DMBP28068 263 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms