RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TMEM14CQ9P0S9 112 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 WDR83OSQ9Y284 106 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 TP53TG1Q9Y2A0 90 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 KCNE3Q9Y6H6 103 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 PHRF1Q9P1Y6 1649 aaKnown RBP3.75□□□□□ -1.81
PTPN13-202ENST00000411767 TRBV30A0A0K0K1B3 111 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 METTL12A8MUP2 240 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-53P01767 116 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 DEFB130BP0DP73 79 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 DEFB130AP0DP74 79 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 LAIR2Q6ISS4 152 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 Q6ZNB5 142 aa3.75□□□□□ -1.81
PTPN13-202ENST00000411767 APRG1Q8IVJ8 170 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 MRPL35Q9NZE8 188 aaKnown RBP3.74□□□□□ -1.81
PTPN13-202ENST00000411767 MYH7BA7E2Y1 1941 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 MYH3P11055 1940 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 MYH6P13533 1939 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-49A0A0A0MS15 119 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 NDUFA1O15239 70 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 DKK1O94907 266 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 CCL2P13500 99 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 FAM19A3Q7Z5A8 133 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 VN1R4Q7Z5H5 301 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 SLC22A18ASQ8N1D0 253 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 C7orf69Q9H7B7 122 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 N4BP2Q86UW6 1770 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-202ENST00000411767 CEP170BQ9Y4F5 1589 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-23P01764 117 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 Q8N8P6 123 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 C20orf78Q9BR46 151 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 PHF7Q9BWX1 381 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3OR16-13A0A075B7E8 117 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-74A0A0B4J1X5 117 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 FOXI1Q12951 378 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 C12orf76Q8N812 135 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-202ENST00000411767 AJUBAQ96IF1 538 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 IGKV1OR2-108A0A075B7D4 117 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 A0A1B0GW64 132 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 EDN2P20800 178 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 PCOLCEQ15113 449 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 C7orf33Q8WU49 177 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 C4orf3Q8WVX3 66 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 CLEC2BQ92478 149 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 KLF16Q9BXK1 252 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-202ENST00000411767 ZNF71Q9NQZ8 489 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-202ENST00000411767 BLCAPP62952 87 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 LILRA3Q8N6C8 439 aaPredicted RBP3.74□□□□□ -1.81
PTPN13-202ENST00000411767 CNTRLQ7Z7A1 2325 aa3.74□□□□□ -1.81
PTPN13-202ENST00000411767 ACYP2P14621 99 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 UBE2D3P61077 147 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 ITLN1Q8WWA0 313 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 PYGO2Q9BRQ0 406 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 ARRDC1-AS1Q9H2J1 176 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 MYH7P12883 1935 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 BUB1B-PAK6H3BSN5 160 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 NMBP08949 121 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 IGLC2P0DOY2 106 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 IGLC3P0DOY3 106 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 CSNK1G2-AS1Q8NCQ2 148 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 BADQ92934 168 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 COX14Q96I36 57 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 REG4Q9BYZ8 158 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 RNASE7Q9H1E1 156 aaKnown RBP3.73□□□□□ -1.81
PTPN13-202ENST00000411767 EVPLQ92817 2033 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 ADAMTSL3P82987 1691 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 RBX1P62877 108 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 UNQ6494/PRO21346Q6UXR6 183 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 PRSS41Q7RTY9 318 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 TRAV40A0A0B4J280 105 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 FOXF2Q12947 444 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 KIAA0040Q15053 153 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 RSPO2Q6UXX9 243 aaPredicted RBP3.73□□□□□ -1.81
PTPN13-202ENST00000411767 Q6ZQY7 126 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 SEM1Q6ZVN7 128 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 ELSPBP1Q96BH3 223 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 ICOSQ9Y6W8 199 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 TRBV27A0A0K0K1C4 114 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 COX7BP24311 80 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 PFN3P60673 137 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 PRR13Q9NZ81 148 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 FAM182BQ5T319 152 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 MRPS18CQ9Y3D5 142 aaKnown RBP3.73□□□□□ -1.81
PTPN13-202ENST00000411767 PEAK1Q9H792 1746 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 PIK3C2AO00443 1686 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 OOSP1A8MZH6 123 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 ZNF660Q6AZW8 331 aaPredicted RBP3.73□□□□□ -1.81
PTPN13-202ENST00000411767 LINC00479Q96M42 142 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 DKK2Q9UBU2 259 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 V9GYV3 84 aa3.73□□□□□ -1.81
PTPN13-202ENST00000411767 TNS2Q63HR2 1409 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 SPTBP11277 2137 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV4-30-2A0A087WSY4 118 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV4-61A0A0C4DH41 118 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 CCL7P80098 99 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 LYZL1Q6UWQ5 148 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 Q8N976 141 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 CCL4L1Q8NHW4 92 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 WNT2BQ93097 391 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 TRAV10A0A0B4J240 114 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 C15orf32Q32M92 178 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms