RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 BAP18Q8IXM2 172 aa9.97□□□□□ -0.81
HLA-DQB2-229ENST00000411527 Q8N1X5 172 aa9.97□□□□□ -0.81
HLA-DQB2-229ENST00000411527 RNF182Q8N6D2 247 aa9.97□□□□□ -0.81
HLA-DQB2-229ENST00000411527 OR4D5Q8NGN0 318 aa9.97□□□□□ -0.81
HLA-DQB2-229ENST00000411527 OR1B1Q8NGR6 318 aa9.97□□□□□ -0.81
HLA-DQB2-229ENST00000411527 SLC45A2Q9UMX9 530 aa9.97□□□□□ -0.81
HLA-DQB2-229ENST00000411527 LINC00588Q9Y4M8 146 aa9.97□□□□□ -0.81
HLA-DQB2-229ENST00000411527 TRAV8-2A0A0B4J237 113 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 ANKRD20A5PA0PJZ0 165 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 PLAC8L1A1L4L8 177 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 CBY3A6NI87 242 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 CTDSPLO15194 276 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 PITX3O75364 302 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SRPXP78539 464 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 FGL1Q08830 312 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TMEM182Q6ZP80 229 aaPredicted RBP9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 BPIFCQ8NFQ6 507 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 DIRAS2Q96HU8 199 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 GPR82Q96P67 336 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 LINC01587Q99440 93 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SLC25A39Q9BZJ4 359 aaPredicted RBP9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 MCUBQ9NWR8 336 aa9.96□□□□□ -0.82
HLA-DQB2-229ENST00000411527 HTN1P15515 57 aa9.95□□□□□ -0.82
HLA-DQB2-229ENST00000411527 CLINT1Q14677 625 aa9.95□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SSX7Q7RTT5 188 aa9.95□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SPATA12Q7Z6I5 190 aa9.95□□□□□ -0.82
HLA-DQB2-229ENST00000411527 RNF141Q8WVD5 230 aa9.95□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TMEM147Q9BVK8 224 aa9.95□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SCRT2Q9NQ03 307 aa9.95□□□□□ -0.82
HLA-DQB2-229ENST00000411527 BOLA2-SMG1P6H3BVE0 249 aa9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 S100A7P31151 101 aa9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 RHOBP62745 196 aa9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 ZNF738Q8NE65 137 aa9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 Q9H8V8 135 aa9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 PPP1R14DQ9NXH3 145 aa9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 RABL2AQ9UBK7 228 aaPredicted RBP9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 RABL2BQ9UNT1 228 aa9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 APOBP04114 4563 aaKnown RBP9.94□□□□□ -0.82
HLA-DQB2-229ENST00000411527 PIGBOS1A0A0B4J2F0 54 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 DUXBA0A1W2PPF3 345 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 PRSS46E5RG02 174 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 WRBO00258 174 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 MED6O75586 246 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TAS2R60P59551 318 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 RPP30P78346 268 aaKnown RBP9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 HIST1H1AQ02539 215 aaPredicted RBP9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 AKR1C1Q04828 323 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SPCS2Q15005 226 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TMEM256Q8N2U0 113 aa9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 CIB3Q96Q77 187 aaPredicted RBP9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TIMM8BQ9Y5J9 83 aaPredicted RBP9.93□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SYNGR2O43760 224 aa9.92□□□□□ -0.82
HLA-DQB2-229ENST00000411527 OR5I1Q13606 314 aa9.92□□□□□ -0.82
HLA-DQB2-229ENST00000411527 OR8A1Q8NGG7 326 aa9.92□□□□□ -0.82
HLA-DQB2-229ENST00000411527 C16orf74Q96GX8 76 aa9.92□□□□□ -0.82
HLA-DQB2-229ENST00000411527 A6NHS1 94 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 H3BRN7 92 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SMIM18P0DKX4 95 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 PRB4P10163 310 aaPredicted RBP9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SLC25A6P12236 298 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 RAP2BP61225 183 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TMEM128Q5BJH2 165 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SPANXN5Q5MJ07 72 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TMEM144Q7Z5S9 345 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TMED4Q7Z7H5 227 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 UHRF2Q96PU4 802 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 SHANK2-AS3Q9BTD1 123 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 NOP10Q9NPE3 64 aaKnown RBP9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 RSL24D1Q9UHA3 163 aaKnown RBP9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 HIGD1AQ9Y241 93 aa9.91□□□□□ -0.82
HLA-DQB2-229ENST00000411527 IL5P05113 134 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 RPL7P18124 248 aaKnown RBP9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 CXCL3P19876 107 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 VAMP1P23763 118 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 KRTAP10-2P60368 255 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 PSG3Q16557 428 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 TTC32Q5I0X7 151 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 ZNF493Q6ZR52 646 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 CYP2G1PQ6ZSU1 146 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 LRTM2Q8N967 370 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 LRRC20Q8TCA0 184 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 GNPNAT1Q96EK6 184 aaPredicted RBP9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 KRTAP1-5Q9BYS1 174 aa9.9□□□□□ -0.82
HLA-DQB2-229ENST00000411527 DNAH5Q8TE73 4624 aa9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 TRAV26-1A0A087WT03 109 aa9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 SMCO3A2RU48 225 aa9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 H3BP45 60 aa9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 HYPMO75409 117 aa9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 OR5G3P0C626 314 aa9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 ACOT7LQ6ZUV0 252 aa9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 OR10J6PQ8NGY7 276 aa9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 TMEM263Q8WUH6 116 aaKnown RBP9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 STRAPQ9Y3F4 350 aaKnown RBP9.89□□□□□ -0.83
HLA-DQB2-229ENST00000411527 A0A0J9YY99 117 aa9.88□□□□□ -0.83
HLA-DQB2-229ENST00000411527 HOXB5P09067 269 aa9.88□□□□□ -0.83
HLA-DQB2-229ENST00000411527 CDKN1BP46527 198 aa9.88□□□□□ -0.83
HLA-DQB2-229ENST00000411527 DLK1P80370 383 aa9.88□□□□□ -0.83
HLA-DQB2-229ENST00000411527 RNASE8Q8TDE3 154 aaKnown RBP9.88□□□□□ -0.83
HLA-DQB2-229ENST00000411527 RXFP4Q8TDU9 374 aa9.88□□□□□ -0.83
HLA-DQB2-229ENST00000411527 RPUSD4Q96CM3 377 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms