RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 JOSD2Q8TAC2 188 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 P3H4Q92791 437 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 LRRC59Q96AG4 307 aaKnown RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 RAB37Q96AX2 223 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 SMIM8Q96KF7 97 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 SPATA33Q96N06 139 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR8B4Q96RC9 309 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 SH3GL1Q99961 368 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 STMN4Q9H169 189 aaPredicted RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 C2orf40Q9H1Z8 148 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 CHMP4BQ9H444 224 aaKnown RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 NMNAT1Q9HAN9 279 aaPredicted RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLC35C2Q9NQQ7 365 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 RRP7BPQ9NSQ0 103 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 IMP3Q9NV31 184 aaKnown RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 RMND1Q9NWS8 449 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLC24A2Q9UI40 661 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 CYSLTR1Q9Y271 337 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 ARL5AQ9Y689 179 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 TOPBP1Q92547 1522 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 LRPPRCP42704 1394 aaKnown RBP-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 RTL9Q8NET4 1388 aa-2.64□□□□□ -2.83
RNU4-88P-201ENST00000411220 NLRP1Q9C000 1473 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 CUL7Q14999 1698 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 TRAV27A0A087WT01 109 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 PNMA8CA0A1B0GUJ8 204 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 TCRBV9S1A1TA0A576 114 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 TCRBV3S1A0A5B6 114 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 TMEM30CPA0ZSE6 113 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 A6NLC8 198 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 NEMFO60524 1076 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 PTP4A3O75365 173 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 FLOT1O75955 427 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 PPP1R17O96001 155 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 CA2P00918 260 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 TCRBP04435 133 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 ACYP1P07311 99 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 CYBAP13498 195 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 EEF1B2P24534 225 aaKnown RBP-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 AZGP1P25311 298 aaKnown RBP-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 CAPZBP47756 277 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 GABARAPL2P60520 117 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 SNAP25P60880 206 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 HBA1P69905 142 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 PMVKQ15126 192 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 TAF12Q16514 161 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 MAPK6Q16659 721 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 IAH1Q2TAA2 248 aaPredicted RBP-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 TMEM41BQ5BJD5 291 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 SYPL2Q5VXT5 272 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 REEP3Q6NUK4 255 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 NPM2Q86SE8 214 aaKnown RBP-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 SPATA24Q86W54 205 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 ANKRD46Q86W74 232 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 NKAIN3Q8N8D7 197 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 ZNF436-AS1Q8NC38 126 aaPredicted RBP-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR52E4Q8NGH9 312 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 OR2Y1Q8NGV0 311 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 SLC25A40Q8TBP6 338 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 ANKRD7Q92527 254 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 POP5Q969H6 163 aaKnown RBP-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 ERP44Q9BS26 406 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 MED18Q9BUE0 208 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 TPPP3Q9BW30 176 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 IDI2Q9BXS1 227 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 NT5C3AQ9H0P0 336 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 PARVGQ9HBI0 331 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 COMMD3Q9UBI1 195 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 KIAA1551Q9HCM1 1747 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 SPEF2Q9C093 1822 aa-2.65□□□□□ -2.83
RNU4-88P-201ENST00000411220 CPSF1Q10570 1443 aaKnown RBP-2.66□□□□□ -2.83
RNU4-88P-201ENST00000411220 KIAA1107Q9UPP5 1409 aa-2.66□□□□□ -2.83
RNU4-88P-201ENST00000411220 RGPD3A6NKT7 1758 aaPredicted RBP-2.66□□□□□ -2.83
RNU4-88P-201ENST00000411220 RGPD4Q7Z3J3 1758 aa-2.66□□□□□ -2.83
RNU4-88P-201ENST00000411220 HMGB1P1B2RPK0 211 aaPredicted RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 H3BSA7 217 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 M0QYV0 167 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 NDUFC1O43677 76 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 TRAPPC6AO75865 159 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 SIX6O95475 246 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 LDOC1O95751 146 aaPredicted RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 TSPAN12O95859 305 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 CD160O95971 181 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 SPP1P10451 314 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 FABP4P15090 132 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 CA8P35219 290 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 CASP4P49662 377 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 EDDM3BP56851 147 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 PIGPP57054 158 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 POLR2GP62487 172 aaKnown RBP eCLIP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 MLLT11Q13015 90 aaPredicted RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 COX17Q14061 63 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 TSTQ16762 297 aaKnown RBP-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 TMEM170BQ5T4T1 132 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 SCIMPQ6UWF3 145 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 IZUMO2Q6UXV1 221 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 FAM19A3Q7Z5A8 133 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 STX19Q8N4C7 294 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 UBL4BQ8N7F7 174 aa-2.66□□□□□ -2.84
RNU4-88P-201ENST00000411220 CCDC112Q8NEF3 446 aa-2.66□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms