RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 LINC00479Q96M42 142 aa11.4□□□□□ -0.58
MINDY4-202ENST00000409881 PLEKHA3Q9HB20 300 aa11.4□□□□□ -0.58
MINDY4-202ENST00000409881 AKAP9Q99996 3911 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 MUC21A0A0G2JKD1 596 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 MUC21A0A140T8X8 626 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 hDV102S1A0JD36 115 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 M0R1X1 148 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 NPY1RP25929 384 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 PRR20EP86478 221 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 PRR20CP86479 221 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 PRR20DP86480 221 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 PRR20BP86481 221 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 PRR20AP86496 221 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 CT45A1Q5HYN5 189 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 MUC21Q5SSG8 566 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 OR52E5Q8NH55 327 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 CT45A3Q8NHU0 189 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 IGF2BP2-AS1Q96M15 143 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 TMEM167BQ9NRX6 74 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 ZNF355PQ9NSJ1 428 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 TMEM140Q9NV12 185 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 ARL2-SNX15V9GYD0 113 aa11.4□□□□□ -0.59
MINDY4-202ENST00000409881 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 OR4C46A6NHA9 309 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 ERVK-16P61578 105 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 RPL39P5Q59GN2 51 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 OR9G1Q8NH87 305 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 TNFRSF14Q92956 283 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 NABP2Q9BQ15 211 aa11.39□□□□□ -0.59
MINDY4-202ENST00000409881 SETXQ7Z333 2677 aaKnown RBP11.39□□□□□ -0.59
MINDY4-202ENST00000409881 J3QR06 171 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 MYOD1P15172 320 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 HOXB4P17483 251 aaPredicted RBP11.38□□□□□ -0.59
MINDY4-202ENST00000409881 GATA3P23771 443 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 CAMPP49913 170 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 BVES-AS1Q5T3Y7 98 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 MOB3BQ86TA1 216 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 OR2T6Q8NHC8 308 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 SLC25A48Q6ZT89 311 aaKnown RBP11.38□□□□□ -0.59
MINDY4-202ENST00000409881 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 NUP35Q8NFH5 326 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 OR10X1Q8NGY0 326 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 ZC2HC1AQ96GY0 325 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 TMEM70Q9BUB7 260 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 HINT2Q9BX68 163 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 CSTL1Q9H114 145 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 IFI27L2Q9H2X8 130 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 ABCA1O95477 2261 aa11.38□□□□□ -0.59
MINDY4-202ENST00000409881 HCP5Q6MZN7 132 aa11.37□□□□□ -0.59
MINDY4-202ENST00000409881 ZANQ9Y493 2812 aa11.37□□□□□ -0.59
MINDY4-202ENST00000409881 IGHV3OR16-10A0A075B7F0 116 aa11.37□□□□□ -0.59
MINDY4-202ENST00000409881 KLF5Q13887 457 aaPredicted RBP11.37□□□□□ -0.59
MINDY4-202ENST00000409881 URB1-AS1Q96HZ7 61 aa11.37□□□□□ -0.59
MINDY4-202ENST00000409881 FAM90A9PA6NNJ1 464 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 CYSRT1A8MQ03 144 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 DEFB125Q8N687 156 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
MINDY4-202ENST00000409881 CSPG4Q6UVK1 2322 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 TRAV40A0A0B4J280 105 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 J3QLI3 93 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 AVPP01185 164 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 CD24P25063 80 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 PSG9Q00887 426 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 PRR27Q6MZM9 219 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 C8orf31Q8N9H6 132 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 OR11H6Q8NGC7 330 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 MCRIP2Q9BUT9 160 aaKnown RBP11.36□□□□□ -0.59
MINDY4-202ENST00000409881 ST20Q9HBF5 79 aa11.36□□□□□ -0.59
MINDY4-202ENST00000409881 CORTO00230 105 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 IGLV1-47P01700 117 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 SAA2P0DJI9 122 aaPredicted RBP11.35□□□□□ -0.59
MINDY4-202ENST00000409881 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 LINC00311Q8N616 119 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 S1PR3Q99500 378 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 COMMD5Q9GZQ3 224 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 OTOGQ6ZRI0 2925 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 ACANP16112 2415 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 ZNF469Q96JG9 3925 aaPredicted RBP11.35□□□□□ -0.59
MINDY4-202ENST00000409881 IGKV1OR2-108A0A075B7D4 117 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 RPS20P60866 119 aaKnown RBP11.35□□□□□ -0.59
MINDY4-202ENST00000409881 SLC25A34Q6PIV7 304 aa11.35□□□□□ -0.59
MINDY4-202ENST00000409881 CENPVL3A0A0U1RRI6 287 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 GAGE12BA1L429 117 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 ODF3BA8MYP8 253 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 UBE2E1P51965 193 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 FOXA3P55318 350 aaPredicted RBP11.34□□□□□ -0.59
MINDY4-202ENST00000409881 NUDT11Q96G61 164 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 ENY2Q9NPA8 101 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 TRAV5A0A0B4J249 113 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 TRAV8-6A0A0B4J262 113 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 C15orf61A6NNL5 157 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 IGHV4-38-2P0DP08 117 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 REG1BP48304 166 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 RASL11AQ6T310 242 aa11.34□□□□□ -0.59
MINDY4-202ENST00000409881 C1orf229Q6ZS94 237 aaPredicted RBP11.34□□□□□ -0.59
MINDY4-202ENST00000409881 AMMECR1Q9Y4X0 333 aaPredicted RBP11.34□□□□□ -0.59
MINDY4-202ENST00000409881 A0A087X0K7 114 aa11.33□□□□□ -0.6
MINDY4-202ENST00000409881 HIGD1CA8MV81 97 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms