RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 CIDEAO60543 219 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 FAM57AQ8TBR7 257 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 ADTRPQ96IZ2 230 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 JMJD8Q96S16 334 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 CCL13Q99616 98 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 HSPB8Q9UJY1 196 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 CFAP46Q8IYW2 2715 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 TEX50A0A1B0GTY4 177 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 MBD3L4A6NDZ8 208 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-202ENST00000409251 MBD3L3A6NE82 208 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-202ENST00000409251 MBD3L5A6NJ08 208 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-202ENST00000409251 CD5LO43866 347 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 LIPFP07098 398 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 P0C879 139 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 BSPH1Q075Z2 132 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 MBD3L2Q8NHZ7 208 aaPredicted RBP10.46□□□□□ -0.73
PTPRN-202ENST00000409251 C11orf52Q96A22 123 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 CALYQ9NYX4 217 aa10.46□□□□□ -0.73
PTPRN-202ENST00000409251 TEX48A0A1B0GUV7 120 aa10.46□□□□□ -0.74
PTPRN-202ENST00000409251 SMKR1H3BMG3 65 aa10.46□□□□□ -0.74
PTPRN-202ENST00000409251 ERHP84090 104 aaKnown RBP10.46□□□□□ -0.74
PTPRN-202ENST00000409251 C11orf53Q8IXP5 236 aa10.46□□□□□ -0.74
PTPRN-202ENST00000409251 EXOC3-AS1Q8N2X6 119 aa10.46□□□□□ -0.74
PTPRN-202ENST00000409251 CXXC4Q9H2H0 198 aa10.46□□□□□ -0.74
PTPRN-202ENST00000409251 IQCF6A8MYZ5 107 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 AZU1P20160 251 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 AMTNQ6UX39 209 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 PCP2Q8IVA1 136 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 NHP2Q9NX24 153 aaKnown RBP10.45□□□□□ -0.74
PTPRN-202ENST00000409251 USP9YO00507 2555 aaPredicted RBP10.45□□□□□ -0.74
PTPRN-202ENST00000409251 C16orf97H3BN30 126 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 ADH4P08319 380 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 IGLC1P0CG04 106 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 FABP2P12104 132 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 FAM71F2Q6NXP2 309 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 PPP1R35Q8TAP8 253 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 IDI2-AS1Q9NZ38 188 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 JKAMPQ9P055 326 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 PPIAL4EA0A075B759 164 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 DLL1O00548 723 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 PPIAL4FP0DN26 164 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 FAM216BQ8N7L0 139 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 URB1-AS1Q96HZ7 61 aa10.45□□□□□ -0.74
PTPRN-202ENST00000409251 RPP21Q9H633 154 aaKnown RBP10.45□□□□□ -0.74
PTPRN-202ENST00000409251 A1L4Q6 167 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 TGFAP01135 160 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PPIFP30405 207 aaKnown RBP10.44□□□□□ -0.74
PTPRN-202ENST00000409251 CSN1S1P47710 185 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 TNFAIP6P98066 277 aaPredicted RBP10.44□□□□□ -0.74
PTPRN-202ENST00000409251 CT45A1Q5HYN5 189 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 CT45A3Q8NHU0 189 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 C1RLQ9NZP8 487 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 IGHV3OR16-8A0A075B7F1 116 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 SRRM4A7MD48 611 aaKnown RBP10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PRSS1P07477 247 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 CD40P25942 277 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 CFHR2P36980 270 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 IFI27P40305 119 aaPredicted RBP10.44□□□□□ -0.74
PTPRN-202ENST00000409251 ERVK11-1P61568 191 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PRR20EP86478 221 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PRR20CP86479 221 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PRR20DP86480 221 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PRR20BP86481 221 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PRR20AP86496 221 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 IGFL3Q6UXB1 125 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 ARMS2P0C7Q2 107 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PSG3Q16557 428 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 PRR7Q8TB68 274 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 DEFB104AQ8WTQ1 72 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 TSSC4Q9Y5U2 329 aaPredicted RBP10.44□□□□□ -0.74
PTPRN-202ENST00000409251 CELSR1Q9NYQ6 3014 aa10.44□□□□□ -0.74
PTPRN-202ENST00000409251 K7ENP7 123 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 CCL21O00585 134 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 RBP4P02753 201 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 SAA1P0DJI8 122 aaPredicted RBP10.43□□□□□ -0.74
PTPRN-202ENST00000409251 LOXL1Q08397 574 aaPredicted RBP10.43□□□□□ -0.74
PTPRN-202ENST00000409251 NBEAP1P0C6P0 100 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 CDSNQ15517 529 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 SH2D6Q7Z4S9 175 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 IFI27L2Q9H2X8 130 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 FAM169BQ8N8A8 192 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 SLC25A2Q9BXI2 301 aa10.43□□□□□ -0.74
PTPRN-202ENST00000409251 DSCAMO60469 2012 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 SLC25A17O43808 307 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 RHOGP84095 191 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 ETDBQ3ZM63 59 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 FAM222BQ8WU58 562 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 SRSF8Q9BRL6 282 aaKnown RBP10.42□□□□□ -0.74
PTPRN-202ENST00000409251 DYNLRB1Q9NP97 96 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 ZNF462Q96JM2 2506 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 ZNF329Q86UD4 541 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 IGF2BP2-AS1Q96M15 143 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 SCRT2Q9NQ03 307 aa10.42□□□□□ -0.74
PTPRN-202ENST00000409251 IGHV3-35A0A0C4DH35 117 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 E7EUB6 86 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 GPR82Q96P67 336 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 EPDR1Q9UM22 224 aa10.41□□□□□ -0.74
PTPRN-202ENST00000409251 TLN2Q9Y4G6 2542 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms