RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 PRCDQ00LT1 54 aa13.01□□□□□ -0.33
LSP1-204ENST00000406638 SMAGPQ0VAQ4 97 aa13.01□□□□□ -0.33
LSP1-204ENST00000406638 VSTM2AQ8TAG5 236 aa13.01□□□□□ -0.33
LSP1-204ENST00000406638 ITLN1Q8WWA0 313 aa13.01□□□□□ -0.33
LSP1-204ENST00000406638 VKORC1Q9BQB6 163 aa13.01□□□□□ -0.33
LSP1-204ENST00000406638 TEX50A0A1B0GTY4 177 aa13□□□□□ -0.33
LSP1-204ENST00000406638 H3BTX0 84 aa13□□□□□ -0.33
LSP1-204ENST00000406638 MGST3O14880 152 aa13□□□□□ -0.33
LSP1-204ENST00000406638 IGKV1-16P04430 117 aa13□□□□□ -0.33
LSP1-204ENST00000406638 AZU1P20160 251 aa13□□□□□ -0.33
LSP1-204ENST00000406638 CD69Q07108 199 aa13□□□□□ -0.33
LSP1-204ENST00000406638 PRSS57Q6UWY2 283 aa13□□□□□ -0.33
LSP1-204ENST00000406638 FXYD5Q96DB9 178 aa13□□□□□ -0.33
LSP1-204ENST00000406638 GPR82Q96P67 336 aa13□□□□□ -0.33
LSP1-204ENST00000406638 PRORYQ9H606 182 aa13□□□□□ -0.33
LSP1-204ENST00000406638 THYN1Q9P016 225 aa13□□□□□ -0.33
LSP1-204ENST00000406638 HIVEP3Q5T1R4 2406 aa13□□□□□ -0.33
LSP1-204ENST00000406638 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13□□□□□ -0.33
LSP1-204ENST00000406638 SRRM4A7MD48 611 aaKnown RBP13□□□□□ -0.33
LSP1-204ENST00000406638 RBPMS2Q6ZRY4 209 aaKnown RBP13□□□□□ -0.33
LSP1-204ENST00000406638 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
LSP1-204ENST00000406638 RNASE2P10153 161 aaKnown RBP12.99□□□□□ -0.33
LSP1-204ENST00000406638 TM4SF20Q53R12 229 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 DUX4L9Q6RFH8 374 aaPredicted RBP12.99□□□□□ -0.33
LSP1-204ENST00000406638 DAZAP1Q96EP5 407 aaKnown RBP12.99□□□□□ -0.33
LSP1-204ENST00000406638 PRSS22Q9GZN4 317 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 AP5S1Q9NUS5 200 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 PRNDQ9UKY0 176 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 IGKV1D-17A0A075B6S4 117 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 FAM106CPP0CH98 169 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 APOBEC3AP31941 199 aaPredicted RBP12.99□□□□□ -0.33
LSP1-204ENST00000406638 ADORA2A-AS1P86434 159 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 FAM106AQ4KMX7 169 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 ZNF257Q9Y2Q1 563 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 ZFYVE26Q68DK2 2539 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 CFAP46Q8IYW2 2715 aa12.99□□□□□ -0.33
LSP1-204ENST00000406638 TEX48A0A1B0GUV7 120 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 A0A1W2PPM0 123 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 C2orf83Q53S99 150 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 C16orf54Q6UWD8 224 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 TMEM108Q6UXF1 575 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 PDPNQ86YL7 162 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 MLST8Q9BVC4 326 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 ANKHD1Q8IWZ3 2542 aaKnown RBP12.98□□□□□ -0.33
LSP1-204ENST00000406638 IGLV3-9A0A075B6K5 115 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 PPIAL4CA0A0B4J2A2 164 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 FBLL1A6NHQ2 334 aaKnown RBP12.98□□□□□ -0.33
LSP1-204ENST00000406638 ZNF207O43670 478 aaKnown RBP12.98□□□□□ -0.33
LSP1-204ENST00000406638 CCL8P80075 99 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 GCSAMQ8N6F7 178 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 ADTRPQ96IZ2 230 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 CALYQ9NYX4 217 aa12.98□□□□□ -0.33
LSP1-204ENST00000406638 F2RL2O00254 374 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 UPK2O00526 184 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 IGHV1-46P01743 117 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 ADIPOQQ15848 244 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 Q71RC1 249 aaPredicted RBP12.97□□□□□ -0.33
LSP1-204ENST00000406638 LINC00305Q7Z4B0 112 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 PIP4P2Q8N4L2 257 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 NPIPB3Q92617 1050 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 ZNRD1Q9P1U0 126 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 CACNA1BQ00975 2339 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 DEFB108BQ8NET1 73 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 PRSS3P2Q8NHM4 247 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 NAV3Q8IVL0 2385 aa12.97□□□□□ -0.33
LSP1-204ENST00000406638 A1L4Q6 167 aa12.96□□□□□ -0.33
LSP1-204ENST00000406638 PRB4P10163 310 aaPredicted RBP12.96□□□□□ -0.33
LSP1-204ENST00000406638 MYCNOSP40205 109 aa12.96□□□□□ -0.33
LSP1-204ENST00000406638 FXYD7P58549 80 aa12.96□□□□□ -0.33
LSP1-204ENST00000406638 C19orf71A6NCJ1 209 aa12.96□□□□□ -0.33
LSP1-204ENST00000406638 ORM2P19652 201 aa12.96□□□□□ -0.33
LSP1-204ENST00000406638 ZNF714Q96N38 554 aa12.96□□□□□ -0.33
LSP1-204ENST00000406638 F11RQ9Y624 299 aaKnown RBP12.96□□□□□ -0.33
LSP1-204ENST00000406638 SOX21Q9Y651 276 aaPredicted RBP12.96□□□□□ -0.33
LSP1-204ENST00000406638 TRAV8-1A0A0A6YYK1 113 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 BMI1P35226 326 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 LOXL1Q08397 574 aaPredicted RBP12.95□□□□□ -0.34
LSP1-204ENST00000406638 FA2HQ7L5A8 372 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 BOD1L2Q8IYS8 172 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 OR5A1Q8NGJ0 315 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 KLF12Q9Y4X4 402 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 SPTAN1Q13813 2472 aaKnown RBP12.95□□□□□ -0.34
LSP1-204ENST00000406638 E7EUB6 86 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 CSN1S1P47710 185 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
LSP1-204ENST00000406638 CIARTQ8N365 385 aaPredicted RBP12.95□□□□□ -0.34
LSP1-204ENST00000406638 IGSF10Q6WRI0 2623 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 FSTL3O95633 263 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 FABP2P12104 132 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 COL8A1P27658 744 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 HSD52Q0P140 79 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 PCP2Q8IVA1 136 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 OR1L8Q8NGR8 309 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 HRNRQ86YZ3 2850 aaPredicted RBP12.94□□□□□ -0.34
LSP1-204ENST00000406638 NMUP48645 174 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 TNFAIP6P98066 277 aaPredicted RBP12.94□□□□□ -0.34
LSP1-204ENST00000406638 OR1L4Q8NGR5 311 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 SIGMAR1Q99720 223 aa12.94□□□□□ -0.34
LSP1-204ENST00000406638 MRPL36Q9P0J6 103 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms