RNA–Protein interactions for RNA: ENST00000406451.8

HDAC9-204, Transcript of histone deacetylase 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HDAC9, Length 9,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-204ENST00000406451 HOXA3O43365 443 aaPredicted RBP4.04□□□□□ -1.76
HDAC9-204ENST00000406451 IGKV1-5P01602 117 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 STAG3L2P0CL84 134 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 BTCP35070 178 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 FOXA3P55318 350 aaPredicted RBP4.04□□□□□ -1.76
HDAC9-204ENST00000406451 C1orf122Q6ZSJ8 110 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 HIST1H4GQ99525 98 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 GGTLC1Q9BX51 225 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 EP400Q96L91 3159 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 PLXNB1O43157 2135 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 TOMM40O96008 361 aa4.04□□□□□ -1.76
HDAC9-204ENST00000406451 HINT1P49773 126 aaPredicted RBP4.04□□□□□ -1.76
HDAC9-204ENST00000406451 F2Z2F3 143 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 LMO1P25800 156 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 FXYD7P58549 80 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 CCL20P78556 96 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 JOSD1Q15040 202 aaPredicted RBP4.03□□□□□ -1.76
HDAC9-204ENST00000406451 DNLZQ5SXM8 178 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 RNF144BQ7Z419 303 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 CHD8Q9HCK8 2581 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 A0A087WX48 190 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 ZNF503-AS2A6NEH8 195 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 GCSAMLQ5JQS6 135 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 OR13C6PQ8NH95 151 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 ZNF581Q9P0T4 197 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 DOPEY1Q5JWR5 2465 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 TMEM50AO95807 157 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 SUPT4H1P63272 117 aaKnown RBP4.03□□□□□ -1.76
HDAC9-204ENST00000406451 PUSL1Q8N0Z8 303 aaKnown RBP4.03□□□□□ -1.76
HDAC9-204ENST00000406451 VPS25Q9BRG1 176 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 TANC2Q9HCD6 1990 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 IZUMO1RA6ND01 250 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 COTL1Q14019 142 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 NMSQ5H8A3 153 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 BIVMQ86UB2 503 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 C18orf15Q96N68 181 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 MGST2Q99735 147 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 RNF126Q9BV68 326 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 VPREB3Q9UKI3 123 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 LRRK2Q5S007 2527 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 IFI27P40305 119 aaPredicted RBP4.03□□□□□ -1.76
HDAC9-204ENST00000406451 PMCHL1Q16048 86 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 UBE2E2Q96LR5 201 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 SEPSECSQ9HD40 501 aaKnown RBP4.03□□□□□ -1.76
HDAC9-204ENST00000406451 TRAV5A0A0B4J249 113 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 TRAV12-3A0A0B4J271 114 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 RNF222A6NCQ9 220 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 CIDEAO60543 219 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 ZNF138P52744 262 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 ADORA2A-AS1P86434 159 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 ZNF833PQ6ZTB9 187 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 EXOC3-AS1Q8N2X6 119 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 TMEM160Q9NX00 188 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 ZNRD1Q9P1U0 126 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 NUP210LQ5VU65 1888 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 A0A1W2PNU3 283 aaPredicted RBP4.03□□□□□ -1.76
HDAC9-204ENST00000406451 LY6G6FQ5SQ64 297 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 PET117Q6UWS5 81 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 OR11H1Q8NG94 326 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 OR11H2Q8NH07 326 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 LINC00477Q96M19 166 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 VCX2Q9H322 139 aa4.03□□□□□ -1.76
HDAC9-204ENST00000406451 APOHP02749 345 aaPredicted RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 SRP19P09132 144 aaKnown RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 TMEM249Q2WGJ8 235 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 HS3ST6Q96QI5 342 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 A0A1W2PPI3 338 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 PSCAO43653 123 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 TRAV9-1A0A075B6T8 112 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 NTF4P34130 210 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 ERASQ7Z444 233 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 C5orf24Q7Z6I8 188 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 WDR86Q86TI4 376 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 KAAG1Q9UBP8 84 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 JMJD1CQ15652 2540 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 NPIPB5A8MRT5 1133 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 HOXB4P17483 251 aaPredicted RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 APOC4P55056 127 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 RNASE7Q9H1E1 156 aaKnown RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 PRORYQ9H606 182 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 DKK4Q9UBT3 224 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 G3V318 75 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 FGF16O43320 207 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 NDUFS7O75251 213 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 SMIM6P0DI80 62 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 RNASE2P10153 161 aaKnown RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 CNTFRP26992 372 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 CDX1P47902 265 aaPredicted RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 LINC00205P59089 165 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 LINC00311Q8N616 119 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 COL4A3Q01955 1670 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 HOXA5P20719 270 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 DEFB131AP59861 70 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 SPATA45Q537H7 98 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 DUX4L9Q6RFH8 374 aaPredicted RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 PPBPP02775 128 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 NRN1Q9NPD7 142 aa4.02□□□□□ -1.77
HDAC9-204ENST00000406451 PPIFP30405 207 aaKnown RBP4.02□□□□□ -1.77
HDAC9-204ENST00000406451 C17orf58Q2M2W7 97 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms