RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 C11orf44Q8N8P7 122 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 C17orf77Q96MU5 243 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 DERL1Q9BUN8 251 aa12.98□□□□□ -0.33
IRF1-202ENST00000405885 CARHSP1Q9Y2V2 147 aaKnown RBP12.98□□□□□ -0.33
IRF1-202ENST00000405885 C2CD3Q4AC94 2353 aa12.97□□□□□ -0.33
IRF1-202ENST00000405885 RELQ04864 619 aaPredicted RBP12.97□□□□□ -0.33
IRF1-202ENST00000405885 RPUSD4Q96CM3 377 aaKnown RBP12.97□□□□□ -0.33
IRF1-202ENST00000405885 RABAC1Q9UI14 185 aa12.97□□□□□ -0.33
IRF1-202ENST00000405885 SCO2A0A1W2PP80 73 aa12.97□□□□□ -0.33
IRF1-202ENST00000405885 CRYBA1P05813 215 aa12.97□□□□□ -0.33
IRF1-202ENST00000405885 ELANEP08246 267 aa12.97□□□□□ -0.33
IRF1-202ENST00000405885 RANP62826 216 aaKnown RBP12.97□□□□□ -0.33
IRF1-202ENST00000405885 MYOZ3Q8TDC0 251 aa12.97□□□□□ -0.33
IRF1-202ENST00000405885 ZNF586Q9NXT0 402 aa12.97□□□□□ -0.33
IRF1-202ENST00000405885 PEF1Q9UBV8 284 aaKnown RBP12.97□□□□□ -0.33
IRF1-202ENST00000405885 ZNF674Q2M3X9 581 aa12.96□□□□□ -0.33
IRF1-202ENST00000405885 MAST4O15021 2626 aa12.96□□□□□ -0.33
IRF1-202ENST00000405885 TMEM89A2RUT3 159 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 MRPS12O15235 138 aaKnown RBP12.95□□□□□ -0.34
IRF1-202ENST00000405885 NBEAP1P0C6P0 100 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 SUMO1P63165 101 aaKnown RBP12.95□□□□□ -0.34
IRF1-202ENST00000405885 DEFB136Q30KP8 78 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 LINC01006Q8NI28 216 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 ATP6V0BQ99437 205 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 SELENOKQ9Y6D0 94 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 ZNF320A2RRD8 509 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 EDN2P20800 178 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 RNF152Q8N8N0 203 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 STXBP6Q8NFX7 210 aa12.95□□□□□ -0.34
IRF1-202ENST00000405885 NDUFB4O95168 129 aa12.94□□□□□ -0.34
IRF1-202ENST00000405885 IGLC2P0DOY2 106 aa12.94□□□□□ -0.34
IRF1-202ENST00000405885 BPIFA4PQ86YQ2 179 aa12.94□□□□□ -0.34
IRF1-202ENST00000405885 HAX1O00165 279 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 SLC17A3O00476 420 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 BUB3O43684 328 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 GGCTO75223 188 aaKnown RBP12.93□□□□□ -0.34
IRF1-202ENST00000405885 TAGLN2P37802 199 aaKnown RBP12.93□□□□□ -0.34
IRF1-202ENST00000405885 KHDC1LQ5JSQ8 128 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 UBE2E2Q96LR5 201 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 ELOVL1Q9BW60 279 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 PARLQ9H300 379 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 TMEM14CQ9P0S9 112 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 CRYBB3P26998 211 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 AKR1C3P42330 323 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 OR8I2Q8N0Y5 310 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 SVBPQ8N300 66 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 DUX3Q96PT4 197 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
IRF1-202ENST00000405885 IGHV4OR15-8A0A075B7B6 117 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 A0A087WW49 117 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 A0A1W2PRE2 83 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 TMEM250H0YL14 139 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 NDUFA4O00483 81 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 PDE6DO43924 150 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 CRLF1O75462 422 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 TM4SF20Q53R12 229 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 EXOC3-AS1Q8N2X6 119 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 METTL26Q96S19 204 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 TENM1Q9UKZ4 2725 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 ZNF727A8MUV8 499 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 LGALS1P09382 135 aaKnown RBP12.92□□□□□ -0.34
IRF1-202ENST00000405885 GNG5P63218 68 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 FAM209BQ5JX69 171 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 WIPF2Q8TF74 440 aaPredicted RBP12.92□□□□□ -0.34
IRF1-202ENST00000405885 LINC00479Q96M42 142 aa12.92□□□□□ -0.34
IRF1-202ENST00000405885 PGPEP1LA6NFU8 196 aa12.91□□□□□ -0.34
IRF1-202ENST00000405885 HIST1H1EP10412 219 aaKnown RBP12.91□□□□□ -0.34
IRF1-202ENST00000405885 MYCNOSP40205 109 aa12.91□□□□□ -0.34
IRF1-202ENST00000405885 SMIM7Q9BQ49 75 aa12.91□□□□□ -0.34
IRF1-202ENST00000405885 AURKAIP1Q9NWT8 199 aaPredicted RBP12.91□□□□□ -0.34
IRF1-202ENST00000405885 TRBV20OR9-2A0A075B6H5 130 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 TRBV19A0A075B6N1 114 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 CD28P10747 220 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 OR4F17Q8NGA8 305 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 TMEM190Q8WZ59 177 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 Q9H3A6 140 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 PGPA6NDG6 321 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 M0R036 132 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 TCF21O43680 179 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 RPEL1Q2QD12 228 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 AWAT1Q58HT5 328 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 IGFL4Q6B9Z1 124 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 CLRN3Q8NCR9 226 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 NIPSNAP3BQ9BS92 247 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 RPH3ALQ9UNE2 315 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 ARL2-SNX15V9GYD0 113 aa12.9□□□□□ -0.34
IRF1-202ENST00000405885 SGK494Q96LW2 274 aa12.89□□□□□ -0.35
IRF1-202ENST00000405885 NKX6-2Q9C056 277 aaPredicted RBP12.89□□□□□ -0.35
IRF1-202ENST00000405885 C16orf95Q9H693 158 aa12.89□□□□□ -0.35
IRF1-202ENST00000405885 U3KQE9 123 aa12.89□□□□□ -0.35
IRF1-202ENST00000405885 A0A1W2PRX2 142 aa12.89□□□□□ -0.35
IRF1-202ENST00000405885 F6UZH7 168 aa12.89□□□□□ -0.35
IRF1-202ENST00000405885 RPL7P18124 248 aaKnown RBP12.89□□□□□ -0.35
IRF1-202ENST00000405885 JMJD8Q96S16 334 aa12.89□□□□□ -0.35
IRF1-202ENST00000405885 TXNDC17Q9BRA2 123 aa12.89□□□□□ -0.35
IRF1-202ENST00000405885 WNK1Q9H4A3 2382 aa12.88□□□□□ -0.35
IRF1-202ENST00000405885 HOXD3P31249 432 aaPredicted RBP12.88□□□□□ -0.35
IRF1-202ENST00000405885 RPL35P42766 123 aaKnown RBP12.88□□□□□ -0.35
IRF1-202ENST00000405885 SYNJ2BPP57105 145 aa12.88□□□□□ -0.35
IRF1-202ENST00000405885 TMEM88Q6PEY1 159 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms