RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.22□□□□□ -0.29
PTPRN2-204ENST00000404321 PATE2Q6UY27 113 aa13.22□□□□□ -0.29
PTPRN2-204ENST00000404321 ZNF546Q86UE3 836 aa13.22□□□□□ -0.29
PTPRN2-204ENST00000404321 MGST2Q99735 147 aa13.22□□□□□ -0.29
PTPRN2-204ENST00000404321 LYRM2Q9NU23 88 aaPredicted RBP13.22□□□□□ -0.29
PTPRN2-204ENST00000404321 HLA-DRB4X5D2U9 266 aa13.22□□□□□ -0.29
PTPRN2-204ENST00000404321 ISLRO14498 428 aa13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 PRAF2O60831 178 aa13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 S100A7P31151 101 aa13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 PLP1P60201 277 aa13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 TMEM252Q8N6L7 170 aa13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 OR4B1Q8NGF8 309 aa13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 ARV1Q9H2C2 271 aa13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 SAV1Q9H4B6 383 aaPredicted RBP13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 UQCC1Q9NVA1 299 aa13.21□□□□□ -0.29
PTPRN2-204ENST00000404321 UBE2L5PA0A1B0GUS4 154 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 ATF4P18848 351 aaPredicted RBP13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 MEOX2P50222 304 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 SULT1A1P50225 295 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 TMEM41BQ5BJD5 291 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 FOXI2Q6ZQN5 318 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 STX12Q86Y82 276 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 RNF182Q8N6D2 247 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 GPR82Q96P67 336 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 MARVELD1Q9BSK0 173 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 IGHV4-28A0A0C4DH34 117 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 SSNA1O43805 119 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 CAMLGP49069 296 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 NUTF2P61970 127 aaKnown RBP13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 CSNK1G2-AS1Q8NCQ2 148 aa13.2□□□□□ -0.3
PTPRN2-204ENST00000404321 TRAV8-2A0A0B4J237 113 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 COX7A2P2O60397 106 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 RPL7P18124 248 aaKnown RBP13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 NANOS2P60321 138 aaKnown RBP13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 BAXQ07812 192 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 SAMD13Q5VXD3 122 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 EBLN2Q6P2I7 272 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 Q8NAQ8 132 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 C11orf68Q9H3H3 251 aaKnown RBP13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 RPRMQ9NS64 109 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 OR5AC2Q9NZP5 309 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 WDR83OSQ9Y284 106 aa13.19□□□□□ -0.3
PTPRN2-204ENST00000404321 RBMY1A1P0DJD3 496 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 RBMY1CP0DJD4 496 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 S100A11P31949 105 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 H2BFSP57053 126 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 RAB31Q13636 194 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 RBMY1FQ15415 496 aaKnown RBP13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 FAM78BQ5VT40 261 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 MIC13Q5XKP0 118 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 LINC00305Q7Z4B0 112 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 C11orf45Q8TAV5 145 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 X6R8D5 127 aa13.18□□□□□ -0.3
PTPRN2-204ENST00000404321 RLN2P04090 185 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 HBG1P69891 147 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 HBG2P69892 147 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 NHLH2Q02577 135 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 VWC2Q2TAL6 325 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 PXDC1Q5TGL8 231 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 MORN5Q5VZ52 161 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 C1QTNF4Q9BXJ3 329 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 NMES1Q9C002 83 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 SLC35B3Q9H1N7 401 aa13.17□□□□□ -0.3
PTPRN2-204ENST00000404321 A0A0J9YX75 114 aa13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 ZNF705EA8MWA4 302 aaPredicted RBP13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 H0YIZ8 118 aa13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 JTBO76095 146 aa13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 ZNF705DP0CH99 300 aaPredicted RBP13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 ZNF705BP0CI00 300 aaPredicted RBP13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 HLA-DMBP28068 263 aa13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 C10orf113Q5VZT2 155 aa13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 CEMP1Q6PRD7 247 aaPredicted RBP13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 S100A7AQ86SG5 101 aa13.16□□□□□ -0.3
PTPRN2-204ENST00000404321 IGHV3OR16-12A0A075B7B8 117 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 NUPR2A6NF83 97 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 E5RGE8 158 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 H3BTX0 84 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 MIFP14174 115 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 FGF7P21781 194 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 PRR20EP86478 221 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 PRR20CP86479 221 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 PRR20DP86480 221 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 PRR20BP86481 221 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 PRR20AP86496 221 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 OPCMLQ14982 345 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 ZNF709Q8N972 641 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 ZNF738Q8NE65 137 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 LRRC20Q8TCA0 184 aa13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 PHLDA1Q8WV24 401 aaPredicted RBP13.15□□□□□ -0.3
PTPRN2-204ENST00000404321 PLECQ15149 4684 aaKnown RBP13.15□□□□□ -0.31
PTPRN2-204ENST00000404321 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
PTPRN2-204ENST00000404321 MRPS12O15235 138 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-204ENST00000404321 PSG9Q00887 426 aa13.14□□□□□ -0.31
PTPRN2-204ENST00000404321 Q6ZRG5 221 aa13.14□□□□□ -0.31
PTPRN2-204ENST00000404321 OR5C1Q8NGR4 320 aa13.14□□□□□ -0.31
PTPRN2-204ENST00000404321 PPP1R1CQ8WVI7 109 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms