RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 TCF15Q12870 199 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 HES1Q14469 280 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 LINC00173Q6ZV60 143 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 BCL6BQ8N143 479 aaPredicted RBP13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 KLRD1Q13241 179 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 EBLN2Q6P2I7 272 aa13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 DAZAP1Q96EP5 407 aaKnown RBP13.59□□□□□ -0.23
SNRNP70-202ENST00000401730 TMSB15BA0A087X1C1 80 aa13.58□□□□□ -0.24
SNRNP70-202ENST00000401730 TRBV9A0A0B4J1U6 114 aa13.58□□□□□ -0.24
SNRNP70-202ENST00000401730 VSTM5A8MXK1 200 aa13.58□□□□□ -0.24
SNRNP70-202ENST00000401730 SNAI2O43623 268 aa13.58□□□□□ -0.24
SNRNP70-202ENST00000401730 FSTL3O95633 263 aa13.58□□□□□ -0.24
SNRNP70-202ENST00000401730 SIGLEC9Q9Y336 463 aa13.58□□□□□ -0.24
SNRNP70-202ENST00000401730 hDV102S1A0JD36 115 aa13.58□□□□□ -0.24
SNRNP70-202ENST00000401730 OR10J3Q5JRS4 329 aa13.58□□□□□ -0.24
SNRNP70-202ENST00000401730 IGHV1-3A0A0C4DH29 117 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 CA7P43166 264 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 PPP1R27Q86WC6 154 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 GRAMD2BQ96HH9 432 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 PPIAL4CA0A0B4J2A2 164 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 NUDT3O95989 172 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 P01737 135 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 PPIAL4GP0DN37 164 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 DLX6P56179 175 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 CHODLQ9H9P2 273 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 HRNRQ86YZ3 2850 aaPredicted RBP13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 GTSF1Q8WW33 167 aa13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 SRSF12Q8WXF0 261 aaKnown RBP13.57□□□□□ -0.24
SNRNP70-202ENST00000401730 FAM181BA6NEQ2 426 aa13.56□□□□□ -0.24
SNRNP70-202ENST00000401730 HIST1H1EP10412 219 aaKnown RBP13.56□□□□□ -0.24
SNRNP70-202ENST00000401730 MC5RP33032 325 aa13.56□□□□□ -0.24
SNRNP70-202ENST00000401730 OR2T8A6NH00 312 aa13.56□□□□□ -0.24
SNRNP70-202ENST00000401730 M0R3E3 92 aa13.56□□□□□ -0.24
SNRNP70-202ENST00000401730 C3orf36Q3SXR2 165 aa13.56□□□□□ -0.24
SNRNP70-202ENST00000401730 GPR82Q96P67 336 aa13.56□□□□□ -0.24
SNRNP70-202ENST00000401730 COL8A1P27658 744 aa13.55□□□□□ -0.24
SNRNP70-202ENST00000401730 SSX8Q7RTT4 187 aa13.55□□□□□ -0.24
SNRNP70-202ENST00000401730 SPATA12Q7Z6I5 190 aa13.55□□□□□ -0.24
SNRNP70-202ENST00000401730 MBD6Q96DN6 1003 aa13.55□□□□□ -0.24
SNRNP70-202ENST00000401730 TRAV9-2A0A087WT02 112 aa13.55□□□□□ -0.24
SNRNP70-202ENST00000401730 TIMM23O14925 209 aa13.55□□□□□ -0.24
SNRNP70-202ENST00000401730 HIGD1AQ9Y241 93 aa13.55□□□□□ -0.24
SNRNP70-202ENST00000401730 ZFHX3Q15911 3703 aa13.55□□□□□ -0.24
SNRNP70-202ENST00000401730 BUB1B-PAK6H3BSN5 160 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 TCRAP04437 139 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 CD3EP07766 207 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 LGALS7P47929 136 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 IGFL4Q6B9Z1 124 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 MUC15Q8N387 334 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 THAP8Q8NA92 274 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 RASL11BQ9BPW5 248 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 CDSNQ15517 529 aa13.54□□□□□ -0.24
SNRNP70-202ENST00000401730 OR4C46A6NHA9 309 aa13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 ATP5IP56385 69 aaPredicted RBP13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 AMMECR1LQ6DCA0 310 aa13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 RPP21Q9H633 154 aaKnown RBP13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 TNFRSF13BO14836 293 aaPredicted RBP13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 CDKN1BP46527 198 aa13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 GP9P14770 177 aa13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 FCGR2BP31994 310 aaPredicted RBP13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 TMEM30BQ3MIR4 351 aa13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 SLC25A39Q9BZJ4 359 aaPredicted RBP13.53□□□□□ -0.24
SNRNP70-202ENST00000401730 APOBEC3AP31941 199 aaPredicted RBP13.52□□□□□ -0.24
SNRNP70-202ENST00000401730 FXYD7P58549 80 aa13.52□□□□□ -0.24
SNRNP70-202ENST00000401730 OR4A5Q8NH83 315 aa13.52□□□□□ -0.24
SNRNP70-202ENST00000401730 TEX22C9J3V5 150 aa13.52□□□□□ -0.25
SNRNP70-202ENST00000401730 CHEK1O14757 476 aa13.52□□□□□ -0.25
SNRNP70-202ENST00000401730 IGHV2-70DA0A0C4DH43 119 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 NCBP2LA6PVI3 153 aaKnown RBP13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 IL4P05112 153 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 C5orf17Q8NAS9 161 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 MRPS16Q9Y3D3 137 aaKnown RBP13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 F11RQ9Y624 299 aaKnown RBP13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 IGLC1P0CG04 106 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 MYCNOSP40205 109 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 HBBP68871 147 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 ASCL5Q7RTU5 278 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 C8orf46Q8TAG6 207 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 NAA38Q9BRA0 125 aaKnown RBP13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 C7orf69Q9H7B7 122 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 NGBQ9NPG2 151 aa13.51□□□□□ -0.25
SNRNP70-202ENST00000401730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.51□□□□□ -0.252e-13■■■■□ 23.5
SNRNP70-202ENST00000401730 LINC00311Q8N616 119 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 URB1-AS1Q96HZ7 61 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 SCNM1Q9BWG6 230 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 HIVEP3Q5T1R4 2406 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 IGLV1-47P01700 117 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 TEX45Q8NA69 505 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 OR4F17Q8NGA8 305 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 TRGV9Q99603 122 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 A0A087X0K7 114 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 RIPPLY3P57055 190 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 TMEM116Q8NCL8 245 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 CST9LQ9H4G1 147 aa13.5□□□□□ -0.25
SNRNP70-202ENST00000401730 A8MWL6 223 aa13.49□□□□□ -0.25
SNRNP70-202ENST00000401730 TOMM40O96008 361 aa13.49□□□□□ -0.25
SNRNP70-202ENST00000401730 IGKV1-17P01599 117 aa13.49□□□□□ -0.25
SNRNP70-202ENST00000401730 ZNF672Q499Z4 452 aaPredicted RBP13.49□□□□□ -0.25
SNRNP70-202ENST00000401730 OR8B3Q8NGG8 313 aa13.49□□□□□ -0.25
SNRNP70-202ENST00000401730 CRYGCP07315 174 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms