RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 LMO3Q8TAP4 145 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 SCRT1Q9BWW7 348 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 KLK8O60259 260 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 ATP5EP2Q5VTU8 51 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 FAM231BA6NCW3 169 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 YBX2Q9Y2T7 364 aaKnown RBP7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 SHPRHQ149N8 1683 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 SBF2Q86WG5 1849 aa7.15□□□□□ -1.27
CACNA1C-220ENST00000399655 SCTP09683 121 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 LIME1Q9H400 295 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 CRYBG1Q9Y4K1 1723 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 ATG2AQ2TAZ0 1938 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 METTL12A8MUP2 240 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 FAM168AQ92567 244 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 C5orf66Q9H5L9 145 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 PRSS47A8MTI9 375 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 TRBV12-3P01733 135 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 BAALC-AS2P0C853 105 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 Q6ZVH6 145 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 NRAPQ86VF7 1730 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 PLXNA1Q9UIW2 1896 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 PRSS29PA6NIE9 313 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 QSER1Q2KHR3 1735 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 IGHV3-66A0A0C4DH42 116 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 ZNF826PQ6ZT77 177 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 HIST3H2BBQ8N257 126 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 LY96Q9Y6Y9 160 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 KCPQ6ZWJ8 1503 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 FAM236DA0A1B0GTK5 79 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 FAM236CP0DP71 79 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 CEND1Q8N111 149 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 OPRPNQ99935 248 aaPredicted RBP7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 TEX38Q6PEX7 206 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 LYPD1Q8N2G4 141 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 TICRRQ7Z2Z1 1910 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 PKD1L3Q7Z443 1732 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 E9PQ18 207 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 UPK3BQ9BT76 320 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 TAF1LQ8IZX4 1826 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 SMIM27A0A1W2PRY6 76 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 SIVA1O15304 175 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 CRYGCP07315 174 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 HEPN1Q6WQI6 88 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 RNF126Q9BV68 326 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 SPINK14Q6IE38 97 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 XIRP1Q702N8 1843 aaKnown RBP7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 K7EMI3 77 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 FHL5Q5TD97 284 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 C9orf139Q6ZV77 190 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 ZNF503Q96F45 646 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 CYTL1Q9NRR1 136 aa7.14□□□□□ -1.27
CACNA1C-220ENST00000399655 TMEM131LA2VDJ0 1609 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 RSPO2Q6UXX9 243 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 TMEM256Q8N2U0 113 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 ZNF664Q8N3J9 261 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 PIK3C2BO00750 1634 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 CLLU1OSQ5K130 101 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 FGF22Q9HCT0 170 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 ZNF71Q9NQZ8 489 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 PFN2P35080 140 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 PILRAQ9UKJ1 303 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 IGLV3-10A0A075B6K4 115 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 APOC4P55056 127 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 ZNRF2Q8NHG8 242 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 LYPD6BQ8NI32 183 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 RREB1Q92766 1687 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 IGKV6D-41A0A0C4DH26 115 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 H0Y9J4 135 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 ZFP36L1Q07352 338 aaKnown RBP7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 HS3ST6Q96QI5 342 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 PHF7Q9BWX1 381 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 MRPS18AQ9NVS2 196 aaKnown RBP7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 CRIM1Q9NZV1 1036 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 IGHV3-49A0A0A0MS15 119 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 YPEL3P61236 119 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 PATE1Q8WXA2 126 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 MRPL36Q9P0J6 103 aaKnown RBP7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 KLK9Q9UKQ9 250 aa7.13□□□□□ -1.27
CACNA1C-220ENST00000399655 TRBV5-5A0A0J9YX44 114 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 PRB2P02812 416 aaPredicted RBP7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 PSG7Q13046 419 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 ARRDC1-AS1Q9H2J1 176 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 SAP30O75446 220 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 EFEMP2O95967 443 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 VWC2Q2TAL6 325 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 USMG5Q96IX5 58 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 ZNF142P52746 1687 aaPredicted RBP7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 IGHV3OR16-13A0A075B7E8 117 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 IGHV3-74A0A0B4J1X5 117 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 TMEM256-PLSCR3K7ERE1 68 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 COX6A1P12074 109 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 SERP2Q8N6R1 65 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 RAMP1O60894 148 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 MPLKIPQ8TAP9 179 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 USP54Q70EL1 1684 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 INSL4Q14641 139 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 TRIP6Q15654 476 aaKnown RBP7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 ALS2Q96Q42 1657 aa7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 NUP210Q8TEM1 1887 aaPredicted RBP7.12□□□□□ -1.27
CACNA1C-220ENST00000399655 ITLN1Q8WWA0 313 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms