RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 OR2T6Q8NHC8 308 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 OR4C12Q96R67 309 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 PLEKHF2Q9H8W4 249 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 RNF122Q9H9V4 155 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 H3BQ15 152 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 IGKV1D-33P01593 117 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 IGKV1-33P01594 117 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 HSPB1P04792 205 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 APELAP0DMC3 54 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 EIF5AP63241 154 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 LDLRAD2Q5SZI1 272 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 OR11H6Q8NGC7 330 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 MRPL16Q9NX20 251 aaKnown RBP4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 C11orf21Q9P2W6 132 aa4.88□□□□□ -1.63
TRAPPC13-202ENST00000399438 A0A0U1RQV1 116 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 RBFOX3A6NFN3 312 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 SYNGR2O43760 224 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 CXCL1P09341 107 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 ZFP36P26651 326 aaKnown RBP4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 ERVFC1-1P60608 527 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 RPS23P62266 143 aaKnown RBP4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 LY6DQ14210 128 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 TMEM178AQ8NBL3 297 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 FABP5P3A8MUU1 101 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 C8orf87E5RJ46 101 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 OR7C2O60412 319 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 EMP1P54849 157 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 NSUN5P1Q3KNT7 163 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 C11orf53Q8IXP5 236 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 EXOC3-AS1Q8N2X6 119 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 CD177Q8N6Q3 437 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 BLNKQ8WV28 456 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 C2orf48Q96LS8 159 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 SLC35B3Q9H1N7 401 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 SMCO4Q9NRQ5 59 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 YTHDF2Q9Y5A9 579 aaKnown RBP4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 VPS13CQ709C8 3753 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 SAA2-SAA4A0A096LPE2 208 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 TRAV38-1A0A0B4J264 116 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 APOA2P02652 100 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 SEC11BP0C7V7 166 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 RBMY1CP0DJD4 496 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 NDUFA6P56556 154 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 CCL8P80075 99 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 ICAM4Q14773 271 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 PRR30Q53SZ7 412 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 ZNF429Q86V71 674 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 SCGB1C1Q8TD33 95 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 PLEKHA3Q9HB20 300 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 NAT8BQ9UHF3 227 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 MPC1Q9Y5U8 109 aa4.87□□□□□ -1.63
TRAPPC13-202ENST00000399438 CRYBG3Q68DQ2 2970 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 DSCAMO60469 2012 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 IGHV1-18A0A0C4DH31 117 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 A0A1B0GXF2 115 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 ODAMA1E959 279 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 C1orf196B1AJZ1 125 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 M0R1X1 148 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 PITX3O75364 302 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 CDK2AP2O75956 126 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 MYCNOSP40205 109 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 ZNF266Q14584 549 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 ZNF497Q6ZNH5 498 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 OR8I2Q8N0Y5 310 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 ACY3Q96HD9 319 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 SPIN2AQ99865 258 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 SPIN2BQ9BPZ2 258 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 GNB1LQ9BYB4 327 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 KCNIP1Q9NZI2 227 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 PAM16Q9Y3D7 125 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 ZFHX3Q15911 3703 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 UTP20O75691 2785 aaKnown RBP4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 HCFC1P51610 2035 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 A0A1B0GWB2 263 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 ATP5G1P05496 136 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 FGF6P10767 208 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 SLC38A11Q08AI6 406 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 ADIRFQ15847 76 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 FAM216BQ8N7L0 139 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 C11orf1Q9H5F2 150 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 FAM208BQ5VWN6 2430 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 CSMD2Q7Z408 3487 aa4.86□□□□□ -1.63
TRAPPC13-202ENST00000399438 A0A1B0GW64 132 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 SS18L1O75177 396 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 SNAPC5O75971 98 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 AMBPP02760 352 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 C10orf91Q5T1B1 145 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 Q6ZSV7 163 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 ZNF525Q8N782 197 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 ITLN1Q8WWA0 313 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 FAM218AQ96MZ4 157 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 SLC25A31Q9H0C2 315 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 CLCF1Q9UBD9 225 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 PROP1O75360 226 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 TRGC2P03986 189 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 SRP19P09132 144 aaKnown RBP4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 EVI2AP22794 236 aa4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 GATA2P23769 480 aaPredicted RBP4.85□□□□□ -1.63
TRAPPC13-202ENST00000399438 PFN2P35080 140 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms