RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 ZNF329Q86UD4 541 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 C11orf44Q8N8P7 122 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 IGLV3-12A0A075B6K2 115 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 SRRM5B3KS81 715 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 IGLC2P0DOY2 106 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 IGLC3P0DOY3 106 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 TIMM21Q9BVV7 248 aa13.18□□□□□ -0.3
ITSN1-209ENST00000399352 QRFPP83859 136 aa13.17□□□□□ -0.3
ITSN1-209ENST00000399352 IGHV2-26A0A0B4J1V2 119 aa13.17□□□□□ -0.3
ITSN1-209ENST00000399352 CD177Q8N6Q3 437 aa13.17□□□□□ -0.3
ITSN1-209ENST00000399352 PLXNB2O15031 1838 aa13.17□□□□□ -0.3
ITSN1-209ENST00000399352 SHANK3Q9BYB0 1731 aa13.17□□□□□ -0.3
ITSN1-209ENST00000399352 IGHV3-53P01767 116 aa13.17□□□□□ -0.3
ITSN1-209ENST00000399352 ZNF688P0C7X2 276 aa13.17□□□□□ -0.3
ITSN1-209ENST00000399352 A0A087WWL8 130 aa13.17□□□□□ -0.3
ITSN1-209ENST00000399352 TRAV13-1A0A0B4J241 112 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 VWCEQ96DN2 955 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 DOCK4Q8N1I0 1966 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 CACNA1GO43497 2377 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 VDAC2P45880 294 aaPredicted RBP13.16□□□□□ -0.3
ITSN1-209ENST00000399352 ROS1P08922 2347 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 KIAA2026Q5HYC2 2103 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 LEPROTO15243 131 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 Q6ZWC4 215 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 Q86TA4 180 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 PRIMA1Q86XR5 153 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 TNFRSF14Q92956 283 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 TRAV41A0A0B4J266 112 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.16□□□□□ -0.3
ITSN1-209ENST00000399352 C9orf118A6NHY6 69 aa13.16□□□□□ -0.3
ITSN1-209ENST00000399352 A0A087WX48 190 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 TMEM200BQ69YZ2 307 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 SPTBN2O15020 2390 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 TMEM213A2RRL7 107 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 K7EP13 123 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 MYMXA0A1B0GTQ4 84 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 INS-IGF2F8WCM5 200 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 H3BMM0 161 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 INSP01308 110 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 TCF15Q12870 199 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 TMEM219Q86XT9 240 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 UBE2WQ96B02 151 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 SPRR3Q9UBC9 169 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 FCN3O75636 299 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 CFHR2P36980 270 aa13.15□□□□□ -0.3
ITSN1-209ENST00000399352 PNRC2Q9NPJ4 139 aaKnown RBP13.15□□□□□ -0.3
ITSN1-209ENST00000399352 IGHV1-3A0A0C4DH29 117 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 C6orf226Q5I0X4 101 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 RPL36AP83881 106 aaKnown RBP13.14□□□□□ -0.31
ITSN1-209ENST00000399352 KLRD1Q13241 179 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 RPL36ALQ969Q0 106 aaKnown RBP13.14□□□□□ -0.31
ITSN1-209ENST00000399352 CYYR1Q96J86 154 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 PRSS22Q9GZN4 317 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 ABCA7Q8IZY2 2146 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 LOC102723996A0A087X1L8 192 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 TRGV1A0A0A0MS02 117 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 IGHV1-8P0DP01 117 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 SLAQ13239 276 aa13.14□□□□□ -0.31
ITSN1-209ENST00000399352 COL11A1P12107 1806 aaPredicted RBP13.14□□□□□ -0.31
ITSN1-209ENST00000399352 NOTCH3Q9UM47 2321 aa13.13□□□□□ -0.31
ITSN1-209ENST00000399352 ERCC8Q13216 396 aa13.13□□□□□ -0.31
ITSN1-209ENST00000399352 DOCK11Q5JSL3 2073 aa13.13□□□□□ -0.31
ITSN1-209ENST00000399352 NHSL1Q5SYE7 1610 aa13.13□□□□□ -0.31
ITSN1-209ENST00000399352 H0YJW9 148 aa13.13□□□□□ -0.31
ITSN1-209ENST00000399352 IGLL1P15814 213 aa13.13□□□□□ -0.31
ITSN1-209ENST00000399352 ZNF236Q9UL36 1845 aa13.13□□□□□ -0.31
ITSN1-209ENST00000399352 RNASE6Q93091 150 aaKnown RBP13.12□□□□□ -0.31
ITSN1-209ENST00000399352 COLQQ9Y215 455 aaPredicted RBP13.12□□□□□ -0.31
ITSN1-209ENST00000399352 ARFGEF3Q5TH69 2177 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 WNT2P09544 360 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 SLC25A16P16260 332 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 GGNQ86UU5 652 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 DNAJC30Q96LL9 226 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 C20orf204Q6ZNR8 217 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 C9orf139Q6ZV77 190 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 LY6G5BQ8NDX9 201 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 LIME1Q9H400 295 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 WNK2Q9Y3S1 2297 aa13.12□□□□□ -0.31
ITSN1-209ENST00000399352 RNASE2P10153 161 aaKnown RBP13.11□□□□□ -0.31
ITSN1-209ENST00000399352 PPDPFLQ8WWR9 84 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 IGHV2-5P01817 119 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 THBDP07204 575 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 HAPLN4Q86UW8 402 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 PRADC1Q9BSG0 188 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 Q6P435 159 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 OVOL2Q9BRP0 275 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 POLR2AP24928 1970 aaKnown RBP13.11□□□□□ -0.31
ITSN1-209ENST00000399352 GAGE1Q13065 139 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 VGLL1Q99990 258 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 RGPD4Q7Z3J3 1758 aa13.11□□□□□ -0.31
ITSN1-209ENST00000399352 K7EP34 96 aa13.1□□□□□ -0.31
ITSN1-209ENST00000399352 GFRA4Q9GZZ7 299 aa13.1□□□□□ -0.31
ITSN1-209ENST00000399352 PRDM6Q9NQX0 595 aa13.1□□□□□ -0.31
ITSN1-209ENST00000399352 LINC00477Q96M19 166 aa13.1□□□□□ -0.31
ITSN1-209ENST00000399352 LYPD1Q8N2G4 141 aa13.1□□□□□ -0.31
ITSN1-209ENST00000399352 RGPD3A6NKT7 1758 aaPredicted RBP13.1□□□□□ -0.31
ITSN1-209ENST00000399352 FER1L5A0AVI2 2057 aa13.1□□□□□ -0.31
ITSN1-209ENST00000399352 CNOT1A5YKK6 2376 aaKnown RBP13.09□□□□□ -0.31
ITSN1-209ENST00000399352 TMEM190Q8WZ59 177 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms