RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 SMIM3Q9BZL3 60 aa13.15□□□□□ -0.3
CTNS-203ENST00000399306 SLC25A32Q9H2D1 315 aa13.15□□□□□ -0.3
CTNS-203ENST00000399306 TUBA4BQ9H853 241 aa13.15□□□□□ -0.3
CTNS-203ENST00000399306 WFDC1Q9HC57 220 aa13.15□□□□□ -0.3
CTNS-203ENST00000399306 A0A087X0K7 114 aa13.14□□□□□ -0.31
CTNS-203ENST00000399306 TFPI2P48307 235 aa13.14□□□□□ -0.31
CTNS-203ENST00000399306 SNRPD3P62318 126 aaKnown RBP13.14□□□□□ -0.31
CTNS-203ENST00000399306 UHRF2Q96PU4 802 aa13.14□□□□□ -0.31
CTNS-203ENST00000399306 SLC25A22Q9H936 323 aa13.14□□□□□ -0.31
CTNS-203ENST00000399306 MAP6D1Q9H9H5 199 aa13.14□□□□□ -0.31
CTNS-203ENST00000399306 DNAH9Q9NYC9 4486 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 ISLRO14498 428 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 FRMD6-AS1P0C7T7 363 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 NHLRC4P0CG21 123 aaPredicted RBP13.13□□□□□ -0.31
CTNS-203ENST00000399306 CXCL2P19875 107 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 BPIFA4PQ86YQ2 179 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 DEFB125Q8N687 156 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 ST6GAL2Q96JF0 529 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 MFFQ9GZY8 342 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 SRD5A3Q9H8P0 318 aa13.13□□□□□ -0.31
CTNS-203ENST00000399306 BORCS7-ASMTA0A0B4J1R7 106 aa13.12□□□□□ -0.31
CTNS-203ENST00000399306 SOCS3O14543 225 aa13.12□□□□□ -0.31
CTNS-203ENST00000399306 MRPS12O15235 138 aaKnown RBP13.12□□□□□ -0.31
CTNS-203ENST00000399306 ID1P41134 155 aa13.12□□□□□ -0.31
CTNS-203ENST00000399306 PSMB3P49720 205 aa13.12□□□□□ -0.31
CTNS-203ENST00000399306 WFDC3Q8IUB2 231 aa13.12□□□□□ -0.31
CTNS-203ENST00000399306 OR2G3Q8NGZ4 309 aa13.12□□□□□ -0.31
CTNS-203ENST00000399306 PSMG3Q9BT73 122 aaPredicted RBP13.12□□□□□ -0.31
CTNS-203ENST00000399306 RSG1Q9BU20 258 aa13.12□□□□□ -0.31
CTNS-203ENST00000399306 MRPL32Q9BYC8 188 aaKnown RBP13.12□□□□□ -0.31
CTNS-203ENST00000399306 A0A0D9SG52 128 aa13.11□□□□□ -0.31
CTNS-203ENST00000399306 ARPC5O15511 151 aa13.11□□□□□ -0.31
CTNS-203ENST00000399306 JTBO76095 146 aa13.11□□□□□ -0.31
CTNS-203ENST00000399306 LEMD1Q68G75 181 aa13.11□□□□□ -0.31
CTNS-203ENST00000399306 GNPNAT1Q96EK6 184 aaPredicted RBP13.11□□□□□ -0.31
CTNS-203ENST00000399306 TMEM14CQ9P0S9 112 aa13.11□□□□□ -0.31
CTNS-203ENST00000399306 KIR2DL5BA0A0G2JN68 375 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 KIR2DL5BA0A0G2JPC4 375 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 ATF4P18848 351 aaPredicted RBP13.1□□□□□ -0.31
CTNS-203ENST00000399306 DEFB131AP59861 70 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 SERF2P84101 59 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 GUK1Q16774 197 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 KIR2DL5AQ8N109 375 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 KCNRGQ8N5I3 272 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 KIR2DL5BQ8NHK3 375 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 CLEC5AQ9NY25 188 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 UBQLN2Q9UHD9 624 aa13.1□□□□□ -0.31
CTNS-203ENST00000399306 LOC102724200A0A096LPH7 203 aaPredicted RBP13.09□□□□□ -0.31
CTNS-203ENST00000399306 SMLR1H3BR10 107 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 ZNF688P0C7X2 276 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 ACOT6Q3I5F7 207 aaPredicted RBP13.09□□□□□ -0.31
CTNS-203ENST00000399306 FFAR4Q5NUL3 377 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 SPATA31B1PQ5VZV4 182 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 OR11H4Q8NGC9 324 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 C17orf77Q96MU5 243 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 CITED4Q96RK1 184 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 HRH4Q9H3N8 390 aa13.09□□□□□ -0.31
CTNS-203ENST00000399306 RBMY1BA6NDE4 496 aaKnown RBP13.08□□□□□ -0.32
CTNS-203ENST00000399306 RBMY1EA6NEQ0 496 aaKnown RBP13.08□□□□□ -0.32
CTNS-203ENST00000399306 ZNF253O75346 499 aa13.08□□□□□ -0.32
CTNS-203ENST00000399306 MBP02144 154 aa13.08□□□□□ -0.32
CTNS-203ENST00000399306 RBMY1DP0C7P1 496 aaKnown RBP13.08□□□□□ -0.32
CTNS-203ENST00000399306 M6PRP20645 277 aa13.08□□□□□ -0.32
CTNS-203ENST00000399306 FAM78BQ5VT40 261 aa13.08□□□□□ -0.32
CTNS-203ENST00000399306 MORN5Q5VZ52 161 aa13.08□□□□□ -0.32
CTNS-203ENST00000399306 LCN15Q6UWW0 184 aa13.08□□□□□ -0.32
CTNS-203ENST00000399306 AKAP14Q86UN6 197 aa13.08□□□□□ -0.32
CTNS-203ENST00000399306 FUT9Q9Y231 359 aa13.08□□□□□ -0.32
CTNS-203ENST00000399306 UBE2CO00762 179 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 C1QBP02746 253 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 IGLC2P0DOY2 106 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 ATP6V0CP27449 155 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 APOC4P55056 127 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 RHOBP62745 196 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 GCSAMLQ5JQS6 135 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 RPL7L1Q6DKI1 246 aaKnown RBP13.07□□□□□ -0.32
CTNS-203ENST00000399306 APRG1Q8IVJ8 170 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 C16orf92Q96LL3 132 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 CLUHP3Q96NS8 147 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 ARPC5LQ9BPX5 153 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 SLC50A1Q9BRV3 221 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 TGP01266 2768 aa13.07□□□□□ -0.32
CTNS-203ENST00000399306 TAS2R45P59539 299 aa13.06□□□□□ -0.32
CTNS-203ENST00000399306 PDE6HQ13956 83 aa13.06□□□□□ -0.32
CTNS-203ENST00000399306 HAGHQ16775 308 aa13.06□□□□□ -0.32
CTNS-203ENST00000399306 PSMG4Q5JS54 123 aa13.06□□□□□ -0.32
CTNS-203ENST00000399306 SBSPONQ8IVN8 264 aa13.06□□□□□ -0.32
CTNS-203ENST00000399306 HSD17B11Q8NBQ5 300 aa13.06□□□□□ -0.32
CTNS-203ENST00000399306 TM2D3Q9BRN9 247 aa13.06□□□□□ -0.32
CTNS-203ENST00000399306 HIST1H1EP10412 219 aaKnown RBP13.05□□□□□ -0.32
CTNS-203ENST00000399306 FAM167A-AS1Q96KT0 104 aa13.05□□□□□ -0.32
CTNS-203ENST00000399306 HYLS1Q96M11 299 aa13.05□□□□□ -0.32
CTNS-203ENST00000399306 CYTL1Q9NRR1 136 aa13.05□□□□□ -0.32
CTNS-203ENST00000399306 RPRMQ9NS64 109 aa13.05□□□□□ -0.32
CTNS-203ENST00000399306 hCG_2014768A0A024R1R8 64 aa13.04□□□□□ -0.32
CTNS-203ENST00000399306 EIF5AP63241 154 aaKnown RBP13.04□□□□□ -0.32
CTNS-203ENST00000399306 TMEM41BQ5BJD5 291 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms