RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 COX6A1P12074 109 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 PSMB8P28062 276 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 MUSTN1Q8IVN3 82 aa7.91□□□□□ -1.14
SMAD9-203ENST00000399275 REPIN1Q9BWE0 567 aaKnown RBP7.91□□□□□ -1.14
SMAD9-203ENST00000399275 F6UB75 175 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 YPEL3P61236 119 aaPredicted RBP7.9□□□□□ -1.14
SMAD9-203ENST00000399275 TFF2Q03403 129 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 ECSCRQ19T08 205 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 LGALS9BQ3B8N2 356 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 LGALS9CQ6DKI2 356 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 GLMPQ8WWB7 406 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 CENPVL3A0A0U1RRI6 287 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 NBL1P41271 181 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 PMS2CLQ68D20 193 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 Q6ZS49 121 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 RNF166Q96A37 237 aaPredicted RBP7.9□□□□□ -1.14
SMAD9-203ENST00000399275 MGAMO43451 1857 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 MYO9BQ13459 2157 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 C17orf98A8MV24 154 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 EGR2P11161 476 aaPredicted RBP7.9□□□□□ -1.14
SMAD9-203ENST00000399275 FOXG1P55316 489 aaPredicted RBP7.9□□□□□ -1.14
SMAD9-203ENST00000399275 RPP25LQ8N5L8 163 aaKnown RBP7.9□□□□□ -1.14
SMAD9-203ENST00000399275 C8orf31Q8N9H6 132 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 CHCHD5Q9BSY4 110 aa7.9□□□□□ -1.14
SMAD9-203ENST00000399275 SLC25A39Q9BZJ4 359 aaPredicted RBP7.9□□□□□ -1.14
SMAD9-203ENST00000399275 PRB2P02812 416 aaPredicted RBP7.9□□□□□ -1.15
SMAD9-203ENST00000399275 CCL17Q92583 94 aa7.9□□□□□ -1.15
SMAD9-203ENST00000399275 UBE2E2Q96LR5 201 aa7.9□□□□□ -1.15
SMAD9-203ENST00000399275 CLPSL1A2RUU4 121 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 GATA2P23769 480 aaPredicted RBP7.89□□□□□ -1.15
SMAD9-203ENST00000399275 EFNB3Q15768 340 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 C5orf64Q2M2E5 130 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 OSR1Q8TAX0 266 aaPredicted RBP7.89□□□□□ -1.15
SMAD9-203ENST00000399275 WBP1Q96G27 269 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 CALYQ9NYX4 217 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 C12orf77C9JDV5 145 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 SLC25A16P16260 332 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 PDLIM4P50479 330 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 LRRC75A-AS1Q8N1F1 130 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 ATP6V0E2Q8NHE4 81 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 FAM236DA0A1B0GTK5 79 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 FAM236CP0DP71 79 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 TMEM14EPQ6UXP3 125 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 DTX2Q86UW9 622 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 DOCK3Q8IZD9 2030 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 NCOR1O75376 2440 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 TINCRA0A1B0GVN0 87 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 MT-ATP8P03928 68 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 ZNF784Q8NCA9 323 aaPredicted RBP7.89□□□□□ -1.15
SMAD9-203ENST00000399275 TMEM190Q8WZ59 177 aa7.89□□□□□ -1.15
SMAD9-203ENST00000399275 CHCHD2Q9Y6H1 151 aaPredicted RBP7.89□□□□□ -1.15
SMAD9-203ENST00000399275 PRB1P04280 392 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 CRIPAKQ8N1N5 446 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 ACP7Q6ZNF0 438 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 TMEM219Q86XT9 240 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 RFNGQ9Y644 331 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 TRAV12-2A0A075B6T6 113 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 KLK10O43240 276 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 CRLF1O75462 422 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 CRYGSP22914 178 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 TIMM21Q9BVV7 248 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 TTTY12Q9BZ98 90 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 IDI2-AS1Q9NZ38 188 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 IGHV3OR15-7A0A075B7D8 119 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 IGHG3P01860 377 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 IL15RAQ13261 267 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 FAM104BQ5XKR9 115 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 SHISA9B4DS77 424 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 PCOLCEQ15113 449 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 OXLD1Q5BKU9 147 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 PEAR1Q5VY43 1037 aaPredicted RBP7.88□□□□□ -1.15
SMAD9-203ENST00000399275 ZNF497Q6ZNH5 498 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 C3orf22Q8N5N4 141 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 FAM110AQ9BQ89 295 aa7.88□□□□□ -1.15
SMAD9-203ENST00000399275 IGKV3D-7A0A0C4DH55 119 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 IGKV1-12A0A0C4DH73 117 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 IGKV1D-12P01611 117 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 RASL10AQ92737 203 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 IGHV3OR16-12A0A075B7B8 117 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 CLPSP04118 112 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 COA6Q5JTJ3 125 aaKnown RBP7.87□□□□□ -1.15
SMAD9-203ENST00000399275 HRCT1Q6UXD1 115 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 PRRG2O14669 202 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 AGFG2O95081 481 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 HGFACQ04756 655 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 RSPO4Q2I0M5 234 aaPredicted RBP7.87□□□□□ -1.15
SMAD9-203ENST00000399275 VWC2Q2TAL6 325 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 C20orf78Q9BR46 151 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 SNRNP200O75643 2136 aaKnown RBP7.87□□□□□ -1.15
SMAD9-203ENST00000399275 TRBV6-6A0A0A6YYG2 114 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 CELA2AP08217 269 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 CSRP1P21291 193 aaKnown RBP7.87□□□□□ -1.15
SMAD9-203ENST00000399275 LYZL1Q6UWQ5 148 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 ZNF826PQ6ZT77 177 aa7.87□□□□□ -1.15
SMAD9-203ENST00000399275 C21orf140B9A014 251 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 SEC16AO15027 2179 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 CFC1BP0CG36 223 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 CFC1P0CG37 223 aa7.86□□□□□ -1.15
SMAD9-203ENST00000399275 NPPCP23582 126 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms