RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 GAGE2DQ9UEU5 116 aa4.46□□□□□ -1.7
PTPRD-205ENST00000397611 MYO9AB2RTY4 2548 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 SAP30O75446 220 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 NBEAP1P0C6P0 100 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 RPS20P60866 119 aaKnown RBP4.45□□□□□ -1.7
PTPRD-205ENST00000397611 MALRD1Q5VYJ5 2156 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 ZNF114Q8NC26 417 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 TMEM167AQ8TBQ9 72 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 MBD6Q96DN6 1003 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 CSTL1Q9H114 145 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 A8MWV9 139 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 NUP35Q8NFH5 326 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 C18orf32Q8TCD1 76 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 PRRC2CQ9Y520 2896 aaKnown RBP4.45□□□□□ -1.7
PTPRD-205ENST00000397611 PLA2G2CQ5R387 149 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 ZNF71Q9NQZ8 489 aaPredicted RBP4.45□□□□□ -1.7
PTPRD-205ENST00000397611 C9orf118A6NHY6 69 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 PRSS57Q6UWY2 283 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 IGFL3Q6UXB1 125 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 CRYGCP07315 174 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 SP9P0CG40 484 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 MC5RP33032 325 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 SCGB3A1Q96QR1 104 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 MGST2Q99735 147 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 SRSF8Q9BRL6 282 aaKnown RBP4.45□□□□□ -1.7
PTPRD-205ENST00000397611 RABAC1Q9UI14 185 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 PTPRQQ9UMZ3 2332 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 A0A1B0GW15 77 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 LINC00473A8K010 186 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 CECR9P0C854 216 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 BVES-AS1Q5T3Y7 98 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 TMEM170BQ5T4T1 132 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 RNF5Q99942 180 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 CHAC1Q9BUX1 264 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 IDI2-AS1Q9NZ38 188 aa4.45□□□□□ -1.7
PTPRD-205ENST00000397611 IGKV3-7A0A075B6H7 116 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 SMAD7O15105 426 aaKnown RBP4.44□□□□□ -1.7
PTPRD-205ENST00000397611 CD24P25063 80 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 ASPHD1Q5U4P2 390 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 EPDR1Q9UM22 224 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 RAXQ9Y2V3 346 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 NCR2O95944 276 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 CELA3AP09093 270 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 LINC00312Q9Y6C7 94 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 ATG2AQ2TAZ0 1938 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV2-70DA0A0C4DH43 119 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 H3BRM9 83 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 UPK2O00526 184 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 DPM2O94777 84 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 TMEM155Q4W5P6 130 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 SLC25A48Q6ZT89 311 aaKnown RBP4.44□□□□□ -1.7
PTPRD-205ENST00000397611 TEX45Q8NA69 505 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 OR5AN1Q8NGI8 311 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 IFI27L1Q96BM0 104 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 MED13Q9UHV7 2174 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 PCNX1Q96RV3 2341 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 PCNTO95613 3336 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 PRR14LQ5THK1 2151 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 GAGE12HA6NDE8 117 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 KLK10O43240 276 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 IGHV1-2P23083 117 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 TMEM78Q5T7P6 136 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 DEFB124Q8NES8 71 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 ZC2HC1AQ96GY0 325 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 TRBV6-1A0A0K0K1D8 114 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 D6R8Y8 96 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 EVI2AP22794 236 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 Q6ZR03 302 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 KAAG1Q9UBP8 84 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 KLF12Q9Y4X4 402 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 S4R3C0 116 aa4.44□□□□□ -1.7
PTPRD-205ENST00000397611 TMEM262E9PQX1 116 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ATP5LO75964 103 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 VKORC1Q9BQB6 163 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ZFHX2Q9C0A1 2572 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-205ENST00000397611 PGPEP1Q9NXJ5 209 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 SLC25A15Q9Y619 301 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ZNF815PA8K554 130 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 CEACAM4O75871 244 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 HTN1P15515 57 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 DGAT2L7PQ6IED9 249 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 LHBP01229 141 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 Q6AWC8 147 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 PVRIGQ6DKI7 326 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ARPC1AQ92747 370 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ZNF492Q9P255 531 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.43□□□□□ -1.7
PTPRD-205ENST00000397611 CD59P13987 128 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 SLAQ13239 276 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ECSCRQ19T08 205 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 DEFB109BQ30KR1 87 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 TEX36Q5VZQ5 186 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ITLN1Q8WWA0 313 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 INSIG2Q9Y5U4 225 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 GTF3C1Q12789 2109 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 K7ERJ3 54 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 KIR3DL3Q8N743 410 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 ZNRF1Q8ND25 227 aa4.43□□□□□ -1.7
PTPRD-205ENST00000397611 OR9G1Q8NH87 305 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms