RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 ARFGEF3Q5TH69 2177 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 CXorf65A6NEN9 183 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 PCP4L1A6NKN8 68 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 SNURFLB1AK76 121 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 MT-ND6P03923 174 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 PDE6HQ13956 83 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 C19orf35Q6ZS72 473 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 EIF4E3Q8N5X7 224 aaKnown RBP6.54□□□□□ -1.36
PTPRD-204ENST00000397606 A6NDX4 124 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 GCGP01275 180 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 GNG5P63218 68 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 BCL6BQ8N143 479 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-204ENST00000397606 THAP8Q8NA92 274 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 PSG8Q9UQ74 426 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 TSSC4Q9Y5U2 329 aaPredicted RBP6.54□□□□□ -1.36
PTPRD-204ENST00000397606 ARL2-SNX15V9GYD0 113 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 PROP1O75360 226 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 ZNF295-AS1Q8N0V1 137 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 ZNF586Q9NXT0 402 aa6.54□□□□□ -1.36
PTPRD-204ENST00000397606 FABP5P3A8MUU1 101 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 SEC14L6B5MCN3 397 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 INS-IGF2F8WCM5 200 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 IGHG2P01859 326 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 C2CD4CQ8TF44 421 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 HSPB9Q9BQS6 159 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 NRN1Q9NPD7 142 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 A0A0C4DFX4 3053 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 SCGB1D1O95968 90 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 TRGC1P0CF51 173 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 FAM3BP58499 235 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-204ENST00000397606 KRTAP10-9P60411 292 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 RFNGQ9Y644 331 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 ZNF688P0C7X2 276 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 ASIPP42127 132 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 FNDC4Q9H6D8 234 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-204ENST00000397606 APCSP02743 223 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 CRISP2P16562 243 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 HAPLN4Q86UW8 402 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 KCNS1Q96KK3 526 aa6.53□□□□□ -1.36
PTPRD-204ENST00000397606 PRRC2AP48634 2157 aaKnown RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 LGALS1P09382 135 aaKnown RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 TMEM95Q3KNT9 176 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 C1QL4Q86Z23 238 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 PGLYRP4Q96LB8 373 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 DUX3Q96PT4 197 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 CARHSP1Q9Y2V2 147 aaKnown RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 IGLV11-55A0A075B6I3 123 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 TRAV21A0A0B4J279 112 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 TMEM89A2RUT3 159 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 H0Y8G0 127 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 ZNF253O75346 499 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 RNASE4P34096 147 aaKnown RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 Q6AWC8 147 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 EXOC3-AS1Q8N2X6 119 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 GLMPQ8WWB7 406 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 LINC01587Q99440 93 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 MRPL27Q9P0M9 148 aaKnown RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 A0A1B0GW64 132 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 OR11H12B2RN74 326 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 CRYGCP07315 174 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 RNASEKQ6P5S7 137 aaKnown RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 MCRIP2Q9BUT9 160 aaKnown RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 USP9YO00507 2555 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-204ENST00000397606 HLA-DQA1P01909 254 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 TCRAP04437 139 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 UTF1Q5T230 341 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 SDF2L1Q9HCN8 221 aa6.52□□□□□ -1.37
PTPRD-204ENST00000397606 RPLP1P05386 114 aaKnown RBP6.51□□□□□ -1.37
PTPRD-204ENST00000397606 PDZD11Q5EBL8 140 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 Q6YL49 198 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 CFHR4Q92496 578 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 RPP21Q9H633 154 aaKnown RBP6.51□□□□□ -1.37
PTPRD-204ENST00000397606 CBY3A6NI87 242 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 LY6LH3BQJ8 138 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 LCN12Q6JVE5 192 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 LINC00477Q96M19 166 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 POLR3KQ9Y2Y1 108 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-204ENST00000397606 NOTCH3Q9UM47 2321 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 CDH23Q9H251 3354 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 TEX22C9J3V5 150 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 CD81P60033 236 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 EBI3Q14213 229 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 TCTEX1D4Q5JR98 221 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 DGAT2L7PQ6IED9 249 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 ATP6V0BQ99437 205 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 DNAJC9-AS1A6NH13 148 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 I3L2K1 104 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 K7EIM0 57 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 ZNF138P52744 262 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 VWC2Q2TAL6 325 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 DYNAPQ8N1N2 210 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 GOLT1BQ9Y3E0 138 aa6.51□□□□□ -1.37
PTPRD-204ENST00000397606 SONP18583 2426 aaKnown RBP6.5□□□□□ -1.37
PTPRD-204ENST00000397606 CSN3P07498 182 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 PSG3Q16557 428 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 ZNF502Q8TBZ5 544 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 AJUBAQ96IF1 538 aa6.5□□□□□ -1.37
PTPRD-204ENST00000397606 UBE2E2Q96LR5 201 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms