RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 GABARAPH6UMI1 98 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 J3KRW8 73 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 GABARAPO95166 117 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 CFDP00746 253 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-208ENST00000397204 ZNF182P17025 639 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-208ENST00000397204 MEOX2P50222 304 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 CCR6P51684 374 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 B2MP61769 119 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 MRPS10P82664 201 aaKnown RBP6.17□□□□□ -1.42
CAPN3-208ENST00000397204 ZNF90Q03938 601 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 OR8I2Q8N0Y5 310 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 DTD1Q8TEA8 209 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 IGF2BP2-AS1Q96M15 143 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 TMEM208Q9BTX3 173 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 HSPB7Q9UBY9 170 aa6.17□□□□□ -1.42
CAPN3-208ENST00000397204 IGKV1D-37A0A075B6S9 117 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 NBDYA0A0U1RRE5 68 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 A8MTW9 85 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 F6UB75 175 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 SMCO1Q147U7 214 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 SLC7A5P1Q8MH63 180 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 PPP1R14BQ96C90 147 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 SLC35E1Q96K37 410 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 C16orf92Q96LL3 132 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 SCGB3A2Q96PL1 93 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 RBKSQ9H477 322 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 DOK5Q9P104 306 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 SLC45A2Q9UMX9 530 aa6.16□□□□□ -1.42
CAPN3-208ENST00000397204 A0A0B4J2A0 478 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 PIGBOS1A0A0B4J2F0 54 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 DUSP14O95147 198 aaKnown RBP6.15□□□□□ -1.42
CAPN3-208ENST00000397204 AKAIN1P0CW23 69 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 TSPOP30536 169 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 S100A7P31151 101 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 GALR1P47211 349 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 CCL18P55774 89 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 LYZP61626 148 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 GGNBP1Q5YKI7 109 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 AMTNQ6UX39 209 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 GPR141Q7Z602 305 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 C6orf223Q8N319 242 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 MAPKAPK5-AS1Q8N8E1 139 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 OR4D5Q8NGN0 318 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 ZNRF2Q8NHG8 242 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 TRGV9Q99603 122 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 PRRT1Q99946 306 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 RSG1Q9BU20 258 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 SHPKQ9UHJ6 478 aa6.15□□□□□ -1.42
CAPN3-208ENST00000397204 CBY3A6NI87 242 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 AKR1C4P17516 323 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 S100A5P33763 92 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 RAB11AP62491 216 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 OR2F1Q13607 317 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 CTF1Q16619 201 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 LYZL2Q7Z4W2 148 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 Q8N1X5 172 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 LINC00469Q8N7U9 141 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 THAP8Q8NA92 274 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 OR51S1Q8NGJ8 323 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 GPR82Q96P67 336 aa6.14□□□□□ -1.43
CAPN3-208ENST00000397204 NACAE9PAV3 2078 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 ZNF98A6NK75 572 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 ZNF705GA8MUZ8 300 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-208ENST00000397204 CTDSPLO15194 276 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 CRXO43186 299 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-208ENST00000397204 ATP5G1P05496 136 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 DEFB130BP0DP73 79 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 DEFB130AP0DP74 79 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 ANXA3P12429 323 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 ATP5G3P48201 142 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 CNN1P51911 297 aaKnown RBP6.13□□□□□ -1.43
CAPN3-208ENST00000397204 SRPXP78539 464 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 FAAP20Q6NZ36 180 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 CLVS1Q8IUQ0 354 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-208ENST00000397204 OR11H7Q8NGC8 314 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 OR4C16Q8NGL9 310 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 OR1B1Q8NGR6 318 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 OR1S1Q8NH92 325 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 SMIM4Q8WVI0 70 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 C17orf77Q96MU5 243 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 MIXL1Q9H2W2 232 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 SCP2D1Q9UJQ7 156 aa6.13□□□□□ -1.43
CAPN3-208ENST00000397204 SRRM2Q9UQ35 2752 aaKnown RBP6.12□□□□□ -1.43
CAPN3-208ENST00000397204 FAT1Q14517 4588 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 IGKV1OR2-108A0A075B7D4 117 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 F5H768 121 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 CTDSP2O14595 271 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 RGS5O15539 181 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 PITX3O75364 302 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 NUDT3O95989 172 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 INSP01308 110 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 PRM2P04554 102 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 RPP30P78346 268 aaKnown RBP6.12□□□□□ -1.43
CAPN3-208ENST00000397204 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 TMEM256Q8N2U0 113 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 BPIFCQ8NFQ6 507 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 KRTAP9-3Q9BYQ3 159 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 SLC25A32Q9H2D1 315 aa6.12□□□□□ -1.43
CAPN3-208ENST00000397204 Q9H8V8 135 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms