RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 MYCNOSP40205 109 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 CFHR3Q02985 330 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 KLK9Q2XQG4 91 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 TEX38Q6PEX7 206 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 PRIMA1Q86XR5 153 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.58□□□□□ -0.56
CAPN3-207ENST00000397200 KLK9Q9UKQ9 250 aa11.58□□□□□ -0.56
CAPN3-207ENST00000397200 IGHV3-21A0A0B4J1V1 117 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 K7EN84 100 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 IGKV1-17P01599 117 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 GP9P14770 177 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 CRYBB3P26998 211 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 ZNF329Q86UD4 541 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 LURAP1LQ8IV03 231 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 LINC00518Q8N0U6 118 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 IGF2BP2-AS1Q96M15 143 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 FANCD2OSQ96PS1 177 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 SETD2Q9BYW2 2564 aaPredicted RBP11.57□□□□□ -0.56
CAPN3-207ENST00000397200 CLPSL1A2RUU4 121 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 TRGC2P03986 189 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 ORM2P19652 201 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 FOXL1Q12952 345 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 KCNIP4Q6PIL6 250 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 NECAP1Q8NC96 275 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 OR1B1Q8NGR6 318 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 RNF114Q9Y508 228 aa11.57□□□□□ -0.56
CAPN3-207ENST00000397200 HELTA6NFD8 242 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 H3BUA1 57 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BKO60814 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 IGLV1-40P01703 118 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 IGHG4P01861 327 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BJP06899 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 FABP1P07148 127 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 PSG1P11464 419 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H1BP16401 226 aaKnown RBP11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BOP23527 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BBP33778 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BDP58876 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BCP62807 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 SUMO1P63165 101 aaKnown RBP11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST2H2BEQ16778 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 TIGITQ495A1 244 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 CENPWQ5EE01 88 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-207ENST00000397200 KLHDC1Q8N7A1 406 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BHQ93079 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 BTF3L4Q96K17 158 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 MS4A10Q96PG2 267 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BNQ99877 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 HIST1H2BMQ99879 126 aa11.56□□□□□ -0.56
CAPN3-207ENST00000397200 AURKAIP1Q9NWT8 199 aaPredicted RBP11.56□□□□□ -0.56
CAPN3-207ENST00000397200 A0A1B0GUS0 222 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 TOMM40O96008 361 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 PF4V1P10720 104 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 GNG4P50150 75 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 FAM3BP58499 235 aaPredicted RBP11.55□□□□□ -0.56
CAPN3-207ENST00000397200 TAS2R60P59551 318 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 FABP9Q0Z7S8 132 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 C10orf99Q6UWK7 81 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 OR10G8Q8NGN5 311 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 TMEM190Q8WZ59 177 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 THYN1Q9P016 225 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 MRPL27Q9P0M9 148 aaKnown RBP11.55□□□□□ -0.56
CAPN3-207ENST00000397200 TMEM14CQ9P0S9 112 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 HIGD1AQ9Y241 93 aa11.55□□□□□ -0.56
CAPN3-207ENST00000397200 TRAV9-1A0A075B6T8 112 aa11.54□□□□□ -0.56
CAPN3-207ENST00000397200 TMEM89A2RUT3 159 aa11.54□□□□□ -0.56
CAPN3-207ENST00000397200 F8W735 103 aaPredicted RBP11.54□□□□□ -0.56
CAPN3-207ENST00000397200 HAX1O00165 279 aa11.54□□□□□ -0.56
CAPN3-207ENST00000397200 IGLV2-8P01709 118 aa11.54□□□□□ -0.56
CAPN3-207ENST00000397200 FOXE3Q13461 319 aa11.54□□□□□ -0.56
CAPN3-207ENST00000397200 FRZBQ92765 325 aa11.54□□□□□ -0.56
CAPN3-207ENST00000397200 TRAV30A0A087WSZ9 112 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 A0A1W2PPQ1 181 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 PPP5D1E7EU14 171 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 OR2J3O76001 311 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 BRI3O95415 125 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 GCGP01275 180 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 TRGV3P03979 118 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 ELANEP08246 267 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 HOXA5P20719 270 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 PSMB8P28062 276 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 FCGR2BP31994 310 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-207ENST00000397200 TPPP2P59282 170 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 YPEL3P61236 119 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-207ENST00000397200 RHOGP84095 191 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 KRTAP24-1Q3LI83 254 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 OR4X2Q8NGF9 303 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 TRBV9A0A0B4J1U6 114 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 WI2-2373I1.2A0A1W2PRP0 233 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 H3BRN7 92 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 PEX7O00628 323 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 S100A8P05109 93 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 TRGC1P0CF51 173 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 RD3LP0DJH9 198 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 RAB9AP51151 201 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 PROK1P58294 105 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 SLC25A39Q9BZJ4 359 aaPredicted RBP11.53□□□□□ -0.56
CAPN3-207ENST00000397200 KLK15Q9H2R5 256 aa11.53□□□□□ -0.56
CAPN3-207ENST00000397200 FBXL7Q9UJT9 491 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms