RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 TECRQ9NZ01 308 aaKnown RBP11.63□□□□□ -0.55
TM9SF1-202ENST00000396854 FAM181BA6NEQ2 426 aa11.62□□□□□ -0.55
TM9SF1-202ENST00000396854 ZNF705GA8MUZ8 300 aaPredicted RBP11.62□□□□□ -0.55
TM9SF1-202ENST00000396854 IQCJQ1A5X6 159 aa11.62□□□□□ -0.55
TM9SF1-202ENST00000396854 TMEM68Q96MH6 324 aa11.62□□□□□ -0.55
TM9SF1-202ENST00000396854 IGKV1OR2-108A0A075B7D4 117 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 OR5G3P0C626 314 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 ZNF90Q03938 601 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 PQLC2Q6ZP29 291 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 NPIPB5A8MRT5 1133 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 OR10J4P0C629 311 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 TMEM256Q8N2U0 113 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 ZNF503Q96F45 646 aa11.61□□□□□ -0.55
TM9SF1-202ENST00000396854 SLC17A3O00476 420 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 CRYGCP07315 174 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 APELAP0DMC3 54 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 OR10J1P30954 320 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 RAB4BP61018 213 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 LBHQ53QV2 105 aaPredicted RBP11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 PVRIGQ6DKI7 326 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 TTC9CQ8N5M4 171 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 V9GYV3 84 aa11.6□□□□□ -0.55
TM9SF1-202ENST00000396854 SUB1P53999 127 aaKnown RBP eCLIP11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 TAS2R45P59539 299 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 CD69Q07108 199 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 ZNF600Q6ZNG1 722 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 NDUFAF3Q9BU61 184 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 TRBV9A0A0B4J1U6 114 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 A0A1B0GUS0 222 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 HELTA6NFD8 242 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 REG1AP05451 166 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 ESDP10768 282 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 CBLN1P23435 193 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 GNG4P50150 75 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 ECSCRQ19T08 205 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 UNQ5815/PRO19632Q6UWF5 114 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 CACNG8Q8WXS5 425 aa11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 F11RQ9Y624 299 aaKnown RBP11.59□□□□□ -0.55
TM9SF1-202ENST00000396854 TRAV41A0A0B4J266 112 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 NUPR1O60356 82 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 CRYBB3P26998 211 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 Q6ZSV7 163 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 OR1L6Q8NGR2 347 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 FAM110DQ8TAY7 271 aaPredicted RBP11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 MRPL32Q9BYC8 188 aaKnown RBP11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 MRPL18Q9H0U6 180 aaKnown RBP11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 A0A1W2PRE2 83 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 G3V318 75 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 ERVFC1-1P60608 527 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 TMEM95Q3KNT9 176 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 CMTM2Q8TAZ6 248 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 TP53TG3Q9ULZ0 132 aa11.58□□□□□ -0.56
TM9SF1-202ENST00000396854 GGTLC3B5MD39 225 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 OR7C2O60412 319 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 C8orf88P0DMB2 117 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 GATA2P23769 480 aaPredicted RBP11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 PPIFP30405 207 aaKnown RBP11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 CFHR3Q02985 330 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 OR5I1Q13606 314 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 KLK9Q2XQG4 91 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 RNF2Q99496 336 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 GNB1LQ9BYB4 327 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 OSTCQ9NRP0 149 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 LINC00527Q9UJ94 153 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 KLK9Q9UKQ9 250 aa11.57□□□□□ -0.56
TM9SF1-202ENST00000396854 PSMB11A5LHX3 300 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 PAFAH1B2P68402 229 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 MS4A10Q96PG2 267 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 WNT10AQ9GZT5 417 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 C16orf95Q9H693 158 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 SERTAD4Q9NUC0 356 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 NAGKQ9UJ70 344 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 TEP1Q99973 2627 aaKnown RBP11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 GRIFINA4D1Z8 144 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 NDUFA7O95182 113 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 SCGB1D1O95968 90 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 CRISP2P16562 243 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 MFAP2P55001 183 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 LINC00310P59036 64 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 MLANAQ16655 118 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 TIGITQ495A1 244 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 C19orf35Q6ZS72 473 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 IGF2BP2-AS1Q96M15 143 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 NF1P21359 2839 aa11.56□□□□□ -0.56
TM9SF1-202ENST00000396854 A0A1B0GV90 55 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 BRI3O95415 125 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 TPPP2P59282 170 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 RPL19P84098 196 aaKnown RBP11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 Q0VG73 95 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 FAM167A-AS1Q96KT0 104 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 IGLV11-55A0A075B6I3 123 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 KIR2DL5BA0A0G2JN68 375 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 KIR2DL5BA0A0G2JPC4 375 aa11.55□□□□□ -0.56
TM9SF1-202ENST00000396854 H3BUA1 57 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms