RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 S100A7AQ86SG5 101 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 OR51G1Q8NGK1 321 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 OR10G4Q8NGN3 311 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 OR10G9Q8NGN4 311 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 OR10G7Q8NGN6 311 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 OR1L4Q8NGR5 311 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 PFDN5Q99471 154 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 RNF2Q99496 336 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 RFNGQ9Y644 331 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 DNAH10Q8IVF4 4471 aa7.76□□□□□ -1.17
NEDD8-202ENST00000396828 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-202ENST00000396828 A0A1W2PPV4 95 aa7.75□□□□□ -1.17
NEDD8-202ENST00000396828 COX7A2P2O60397 106 aa7.75□□□□□ -1.17
NEDD8-202ENST00000396828 GATA2P23769 480 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-202ENST00000396828 S100A7P31151 101 aa7.75□□□□□ -1.17
NEDD8-202ENST00000396828 RHOBP62745 196 aa7.75□□□□□ -1.17
NEDD8-202ENST00000396828 BLOC1S1P78537 153 aa7.75□□□□□ -1.17
NEDD8-202ENST00000396828 GTSCR1Q86UQ5 136 aa7.75□□□□□ -1.17
NEDD8-202ENST00000396828 FAM213BQ8TBF2 198 aa7.75□□□□□ -1.17
NEDD8-202ENST00000396828 SAT2Q96F10 170 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-202ENST00000396828 CHRDL1Q9BU40 450 aa7.75□□□□□ -1.17
NEDD8-202ENST00000396828 ACTR3CQ9C0K3 210 aaPredicted RBP7.75□□□□□ -1.17
NEDD8-202ENST00000396828 TEX46H3BTG2 121 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 GGCTO75223 188 aaKnown RBP7.74□□□□□ -1.17
NEDD8-202ENST00000396828 HYPMO75409 117 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 YIF1AO95070 293 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 OR2C1O95371 312 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 IL4P05112 153 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 OR5G3P0C626 314 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 ORM2P19652 201 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 ADMP35318 185 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 RAB2AP61019 212 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 LYZP61626 148 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 DEFB114Q30KQ6 69 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 C10orf113Q5VZT2 155 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 OR1B1Q8NGR6 318 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 GATAD1Q8WUU5 269 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 RNF125Q96EQ8 232 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 PBDC1Q9BVG4 233 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 VSIRQ9H7M9 311 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 DNAJC4Q9NNZ3 241 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 RPRMQ9NS64 109 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 PLA2G2EQ9NZK7 142 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 DOK5Q9P104 306 aa7.74□□□□□ -1.17
NEDD8-202ENST00000396828 PUS1Q9Y606 427 aaKnown RBP eCLIP7.74□□□□□ -1.17
NEDD8-202ENST00000396828 C2orf70A6NJV1 201 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 NDUFA4O00483 81 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 H2AFB1P0C5Y9 115 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 FOLR2P14207 255 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 CDC34P49427 236 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-202ENST00000396828 PLP1P60201 277 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 FAM78BQ5VT40 261 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 FAM122CQ6P4D5 195 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 RPP25LQ8N5L8 163 aaKnown RBP7.73□□□□□ -1.17
NEDD8-202ENST00000396828 MRPL32Q9BYC8 188 aaKnown RBP7.73□□□□□ -1.17
NEDD8-202ENST00000396828 PEMTQ9UBM1 199 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 PFDN2Q9UHV9 154 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 RNF24Q9Y225 148 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 HIGD1AQ9Y241 93 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 VPS13DQ5THJ4 4388 aa7.73□□□□□ -1.17
NEDD8-202ENST00000396828 CTXND1A0A1B0GTU2 59 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 OR11H12B2RN74 326 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 HBE1P02100 147 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 FHITP49789 147 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 TAS2R45P59539 299 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 GUCA2BQ16661 112 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 FAM106AQ4KMX7 169 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 GCSAMLQ5JQS6 135 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 CLLU1Q5K131 121 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 LINC00305Q7Z4B0 112 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 OR2K2Q8NGT1 345 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 TMEM37Q8WXS4 190 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 RAB24Q969Q5 203 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 SRD5A3Q9H8P0 318 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 SLC25A22Q9H936 323 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 RABAC1Q9UI14 185 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 FUT9Q9Y231 359 aa7.72□□□□□ -1.17
NEDD8-202ENST00000396828 IGHV3-35A0A0C4DH35 117 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 ZNF320A2RRD8 509 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 MAP1LC3B2A6NCE7 125 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 NMBP08949 121 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 CBLN1P23435 193 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 KHDC3LQ587J8 217 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 TOMM20LQ6UXN7 152 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 GPHB5Q86YW7 130 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 DYNLRB2Q8TF09 96 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 SFT2D1Q8WV19 159 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 MBD3L1Q8WWY6 194 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 NARS2Q96I59 477 aaKnown RBP7.71□□□□□ -1.18
NEDD8-202ENST00000396828 METTL26Q96S19 204 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 C20orf24Q9BUV8 137 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 MAP1LC3BQ9GZQ8 125 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 ZFAND3Q9H8U3 227 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 SEPSECSQ9HD40 501 aaKnown RBP7.71□□□□□ -1.18
NEDD8-202ENST00000396828 TECRQ9NZ01 308 aaKnown RBP7.71□□□□□ -1.18
NEDD8-202ENST00000396828 MRPL27Q9P0M9 148 aaKnown RBP7.71□□□□□ -1.18
NEDD8-202ENST00000396828 MLXQ9UH92 298 aa7.71□□□□□ -1.18
NEDD8-202ENST00000396828 TMEM213A2RRL7 107 aa7.7□□□□□ -1.18
NEDD8-202ENST00000396828 C8orf88P0DMB2 117 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms