RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 NDUFAF3Q9BU61 184 aa12.66□□□□□ -0.38
GNE-202ENST00000396594 NSUN5P1Q3KNT7 163 aa12.66□□□□□ -0.38
GNE-202ENST00000396594 SPXQ9BT56 116 aa12.66□□□□□ -0.38
GNE-202ENST00000396594 MUC21Q5SSG8 566 aa12.66□□□□□ -0.38
GNE-202ENST00000396594 NEGR1Q7Z3B1 354 aa12.66□□□□□ -0.38
GNE-202ENST00000396594 K7EMI3 77 aa12.65□□□□□ -0.38
GNE-202ENST00000396594 THAP8Q8NA92 274 aa12.65□□□□□ -0.38
GNE-202ENST00000396594 KLRD1Q13241 179 aa12.65□□□□□ -0.39
GNE-202ENST00000396594 ORAOV1Q8WV07 137 aa12.65□□□□□ -0.39
GNE-202ENST00000396594 IGKV3OR2-268A0A0C4DH90 116 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 NTF4P34130 210 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 KIAA1671Q9BY89 1806 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 MYMXA0A1B0GTQ4 84 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 SRRM4A7MD48 611 aaKnown RBP12.64□□□□□ -0.39
GNE-202ENST00000396594 HOXA3O43365 443 aaPredicted RBP12.64□□□□□ -0.39
GNE-202ENST00000396594 CA1P00915 261 aaPredicted RBP12.64□□□□□ -0.39
GNE-202ENST00000396594 FOXE3Q13461 319 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 SS18Q15532 418 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 ATXN8Q156A1 80 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 UBE2DNLQ8IWF7 75 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 PRSS46E5RG02 174 aa12.64□□□□□ -0.39
GNE-202ENST00000396594 LOXP28300 417 aaPredicted RBP12.64□□□□□ -0.39
GNE-202ENST00000396594 TMEM89A2RUT3 159 aa12.63□□□□□ -0.39
GNE-202ENST00000396594 CKS1BP61024 79 aa12.63□□□□□ -0.39
GNE-202ENST00000396594 ERCC8Q13216 396 aa12.63□□□□□ -0.39
GNE-202ENST00000396594 PHLDA1Q8WV24 401 aaPredicted RBP12.63□□□□□ -0.39
GNE-202ENST00000396594 NDUFA3O95167 84 aa12.63□□□□□ -0.39
GNE-202ENST00000396594 TOMM7Q9P0U1 55 aa12.63□□□□□ -0.39
GNE-202ENST00000396594 SPCS1Q9Y6A9 102 aa12.63□□□□□ -0.39
GNE-202ENST00000396594 A0A1W2PPI3 338 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 CTAG1AP78358 180 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 SELLP14151 372 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 LYZL1Q6UWQ5 148 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 LYPD2Q6UXB3 125 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 C10orf126Q8N4M7 172 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 GZMBP10144 247 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 SPANXA1Q9NS26 97 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 WDR81Q562E7 1941 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 C10orf55Q5SWW7 151 aa12.62□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BKO60814 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BJP06899 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BOP23527 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BBP33778 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BDP58876 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BCP62807 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST2H2BEQ16778 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.61□□□□□ -0.39
GNE-202ENST00000396594 SFTA2Q6UW10 78 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BHQ93079 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BNQ99877 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HIST1H2BMQ99879 126 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 IGKV2-40A0A087WW87 121 aaPredicted RBP12.61□□□□□ -0.39
GNE-202ENST00000396594 RBAKDNA6NC62 111 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 ZNF815PA8K554 130 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 IGKV2D-40P01614 121 aaPredicted RBP12.61□□□□□ -0.39
GNE-202ENST00000396594 Q0VG73 95 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 LCNL1Q6ZST4 164 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 LINC00469Q8N7U9 141 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 LY6G5BQ8NDX9 201 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 C17orf58Q2M2W7 97 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 BCL6BQ8N143 479 aaPredicted RBP12.61□□□□□ -0.39
GNE-202ENST00000396594 H3BRN7 92 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 K7EM74 188 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 PFN1P07737 140 aaKnown RBP12.61□□□□□ -0.39
GNE-202ENST00000396594 TMEM256Q8N2U0 113 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 IGFBPL1Q8WX77 278 aa12.61□□□□□ -0.39
GNE-202ENST00000396594 HTN3P15516 51 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 DAZAP2Q15038 168 aaPredicted RBP12.6□□□□□ -0.39
GNE-202ENST00000396594 KRTAP27-1Q3LI81 207 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 ABCA7Q8IZY2 2146 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 C3orf56Q8N813 242 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 PRSS33Q8NF86 280 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 DNAJC30Q96LL9 226 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 TRAV5A0A0B4J249 113 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 VSIRQ9H7M9 311 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 GGTLC3B5MD39 225 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 C15orf65H3BRN8 121 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 C21orf62-AS1Q17RA5 79 aa12.6□□□□□ -0.39
GNE-202ENST00000396594 C1orf147Q96MC9 270 aaPredicted RBP12.6□□□□□ -0.39
GNE-202ENST00000396594 RPL15P61313 204 aaKnown RBP12.59□□□□□ -0.39
GNE-202ENST00000396594 TMEM219Q86XT9 240 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 ZNF114Q8NC26 417 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 A0A1B0GWB2 263 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 TSPAN13O95857 204 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 ZNF876PQ49A33 203 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 KLF17Q5JT82 389 aaPredicted RBP12.59□□□□□ -0.39
GNE-202ENST00000396594 OR11H6Q8NGC7 330 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 TRBV19A0A075B6N1 114 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 TRAV3A0A0B4J244 114 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 ERG28Q9UKR5 140 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 FAM215AQ9Y5M1 114 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 A0A087WV48 116 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 M0R2P5 195 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 NUP35Q8NFH5 326 aa12.59□□□□□ -0.39
GNE-202ENST00000396594 TRGV1A0A0A0MS02 117 aa12.58□□□□□ -0.4
GNE-202ENST00000396594 SSBP4Q9BWG4 385 aaPredicted RBP12.58□□□□□ -0.4
GNE-202ENST00000396594 HELZP42694 1942 aaKnown RBP12.58□□□□□ -0.4
GNE-202ENST00000396594 ATP6V0E1O15342 81 aa12.58□□□□□ -0.4
GNE-202ENST00000396594 CD24P25063 80 aa12.58□□□□□ -0.4
GNE-202ENST00000396594 PAX2Q02962 417 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms