RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 CDC42EP3Q9UKI2 254 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 GOLT1BQ9Y3E0 138 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 CRYBG3Q68DQ2 2970 aa9.53□□□□□ -0.88
ITGB1-202ENST00000396033 MGST1P10620 155 aaKnown RBP9.52□□□□□ -0.88
ITGB1-202ENST00000396033 MYCNOSP40205 109 aa9.52□□□□□ -0.88
ITGB1-202ENST00000396033 DMRTA1Q5VZB9 504 aa9.52□□□□□ -0.88
ITGB1-202ENST00000396033 ZNF491Q8N8L2 437 aa9.52□□□□□ -0.88
ITGB1-202ENST00000396033 FAM110DQ8TAY7 271 aaPredicted RBP9.52□□□□□ -0.88
ITGB1-202ENST00000396033 C7orf69Q9H7B7 122 aa9.52□□□□□ -0.88
ITGB1-202ENST00000396033 RPH3ALQ9UNE2 315 aa9.52□□□□□ -0.88
ITGB1-202ENST00000396033 PGPA6NDG6 321 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 SLC17A3O00476 420 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 YPEL3P61236 119 aaPredicted RBP9.52□□□□□ -0.89
ITGB1-202ENST00000396033 GBGT1Q8N5D6 347 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 C5orf56Q8N8D9 126 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 RNASE8Q8TDE3 154 aaKnown RBP9.52□□□□□ -0.89
ITGB1-202ENST00000396033 F8W735 103 aaPredicted RBP9.52□□□□□ -0.89
ITGB1-202ENST00000396033 H3BRN7 92 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 GCGP01275 180 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 RBX1P62877 108 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 FOXL1Q12952 345 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 SHANK2-AS3Q9BTD1 123 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 TMEM14CQ9P0S9 112 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 MOB4Q9Y3A3 225 aa9.52□□□□□ -0.89
ITGB1-202ENST00000396033 TRAV34A0A0B4J273 112 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 OR2T8A6NH00 312 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 NHLRC2Q8NBF2 726 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 SCGB2A1O75556 95 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 GAGE1Q13065 139 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 BTF3L4Q96K17 158 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 Q9H3A6 140 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 HIF1ANQ9NWT6 349 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 EPDR1Q9UM22 224 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 WI2-2373I1.2A0A1W2PRP0 233 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 B4DSR2 109 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 IGLV2-8P01709 118 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 TYMSP04818 313 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 Q6ZVH6 145 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 RNASE7Q9H1E1 156 aaKnown RBP9.51□□□□□ -0.89
ITGB1-202ENST00000396033 IL36BQ9NZH7 164 aa9.51□□□□□ -0.89
ITGB1-202ENST00000396033 UBE2G1P62253 170 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 LINC01548A6NM66 108 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 M0R143 59 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 HIST1H1EP10412 219 aaKnown RBP9.5□□□□□ -0.89
ITGB1-202ENST00000396033 SLC25A16P16260 332 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 BPIFA4PQ86YQ2 179 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 C5orf17Q8NAS9 161 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 ZNF586Q9NXT0 402 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 V9GYV3 84 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 G3V318 75 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 ISLRO14498 428 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 FCGR2BP31994 310 aaPredicted RBP9.5□□□□□ -0.89
ITGB1-202ENST00000396033 RPL15P61313 204 aaKnown RBP9.5□□□□□ -0.89
ITGB1-202ENST00000396033 Q6ZWC4 215 aa9.5□□□□□ -0.89
ITGB1-202ENST00000396033 RHOGP84095 191 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 RPEL1Q2QD12 228 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 C15orf32Q32M92 178 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 S100A7AQ86SG5 101 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 BAGE2Q86Y30 109 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 OR4F17Q8NGA8 305 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 PIFOQ8TCI5 191 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 MEGF9Q9H1U4 602 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 SOX21Q9Y651 276 aaPredicted RBP9.49□□□□□ -0.89
ITGB1-202ENST00000396033 F2Z2F3 143 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 FRMD6-AS1P0C7T7 363 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 VN1R17PQ8TDU5 208 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 OSTCQ9NRP0 149 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 TMEM183BQ1AE95 376 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 IBA57Q5T440 356 aaKnown RBP9.49□□□□□ -0.89
ITGB1-202ENST00000396033 TXN2Q99757 166 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
ITGB1-202ENST00000396033 CELSR2Q9HCU4 2923 aa9.48□□□□□ -0.89
ITGB1-202ENST00000396033 Q8N976 141 aa9.48□□□□□ -0.89
ITGB1-202ENST00000396033 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
ITGB1-202ENST00000396033 MAP1AP78559 2803 aaPredicted RBP9.48□□□□□ -0.89
ITGB1-202ENST00000396033 CTSGP08311 255 aa9.48□□□□□ -0.89
ITGB1-202ENST00000396033 GPR183P32249 361 aa9.48□□□□□ -0.89
ITGB1-202ENST00000396033 LY6EQ16553 131 aa9.48□□□□□ -0.89
ITGB1-202ENST00000396033 BCL6BQ8N143 479 aaPredicted RBP9.48□□□□□ -0.89
ITGB1-202ENST00000396033 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
ITGB1-202ENST00000396033 SERTAD4Q9NUC0 356 aa9.48□□□□□ -0.89
ITGB1-202ENST00000396033 TCRAP04437 139 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 EXOC3-AS1Q8N2X6 119 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 CMTM2Q8TAZ6 248 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 ZNF502Q8TBZ5 544 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 RNF24Q9Y225 148 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 TRBV19A0A075B6N1 114 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 TRAV9-1A0A075B6T8 112 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 H3BUX3 64 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 AMY1AP04745 511 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 IGLC2P0DOY2 106 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 MS4A10Q96PG2 267 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 ANKRD17O75179 2603 aaKnown RBP9.47□□□□□ -0.89
ITGB1-202ENST00000396033 ZFHX3Q15911 3703 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 TRBV9A0A0B4J1U6 114 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 COL8A1P27658 744 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 ADMP35318 185 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 PTTG1IPP53801 180 aa9.47□□□□□ -0.89
ITGB1-202ENST00000396033 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms