RNA–Protein interactions for RNA: ENST00000395310.6

SEC31A-205, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SEC31A, Length 4,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-205ENST00000395310 NAV3Q8IVL0 2385 aa10.63□□□□□ -0.71
SEC31A-205ENST00000395310 D6R8Y8 96 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 F5H697 171 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 MGPP08493 103 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 SRSF9Q13242 221 aaKnown RBP eCLIP10.62□□□□□ -0.71
SEC31A-205ENST00000395310 ASCL5Q7RTU5 278 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 OR2K2Q8NGT1 345 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 CSTL1Q9H114 145 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 MAP1LC3AQ9H492 121 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 HCFC1P51610 2035 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 MRPL52Q86TS9 123 aaKnown RBP10.62□□□□□ -0.71
SEC31A-205ENST00000395310 A0A1W2PPI3 338 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 NPIPB5A8MRT5 1133 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 CD59P13987 128 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 LYPD2Q6UXB3 125 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 SLC25A48Q6ZT89 311 aaKnown RBP10.62□□□□□ -0.71
SEC31A-205ENST00000395310 ATP5L2Q7Z4Y8 100 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 ORMDL3Q8N138 153 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 CHCHD1Q96BP2 118 aaKnown RBP10.62□□□□□ -0.71
SEC31A-205ENST00000395310 PLSCR4Q9NRQ2 329 aa10.62□□□□□ -0.71
SEC31A-205ENST00000395310 H3BVH4 76 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 PPP1R27Q86WC6 154 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 HIST1H4GQ99525 98 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 FOXC2Q99958 501 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 IGHV1-24A0A0C4DH33 117 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 CNTFRP26992 372 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 CEACAM3P40198 252 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 ZNF502Q8TBZ5 544 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 CPAMD8Q8IZJ3 1885 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
SEC31A-205ENST00000395310 ZNF474Q6S9Z5 364 aaPredicted RBP10.61□□□□□ -0.71
SEC31A-205ENST00000395310 OTORQ9NRC9 128 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 LOC107984156A0A0G2JMH3 177 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 CFHR2P36980 270 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 ARL17AQ8IVW1 177 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 SIGMAR1Q99720 223 aa10.61□□□□□ -0.71
SEC31A-205ENST00000395310 NHP2Q9NX24 153 aaKnown RBP10.61□□□□□ -0.71
SEC31A-205ENST00000395310 FAM231BA6NCW3 169 aa10.6□□□□□ -0.71
SEC31A-205ENST00000395310 SOX21Q9Y651 276 aaPredicted RBP10.6□□□□□ -0.71
SEC31A-205ENST00000395310 SMIM13P0DJ93 91 aa10.6□□□□□ -0.71
SEC31A-205ENST00000395310 RPL7P18124 248 aaKnown RBP10.6□□□□□ -0.71
SEC31A-205ENST00000395310 PRSS57Q6UWY2 283 aa10.6□□□□□ -0.71
SEC31A-205ENST00000395310 AMN1Q8IY45 258 aa10.6□□□□□ -0.71
SEC31A-205ENST00000395310 OR5AN1Q8NGI8 311 aa10.6□□□□□ -0.71
SEC31A-205ENST00000395310 C8orf46Q8TAG6 207 aa10.6□□□□□ -0.71
SEC31A-205ENST00000395310 Q8TAT8 98 aa10.6□□□□□ -0.71
SEC31A-205ENST00000395310 DEFB104AQ8WTQ1 72 aa10.6□□□□□ -0.71
SEC31A-205ENST00000395310 SLC25A39Q9BZJ4 359 aaPredicted RBP10.6□□□□□ -0.71
SEC31A-205ENST00000395310 IGKV2-40A0A087WW87 121 aaPredicted RBP10.6□□□□□ -0.71
SEC31A-205ENST00000395310 IGKV2D-40P01614 121 aaPredicted RBP10.6□□□□□ -0.71
SEC31A-205ENST00000395310 IGHV2-26A0A0B4J1V2 119 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 NDUFB8O95169 186 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 BMI1P35226 326 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 MFAP4P55083 255 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 LYZL1Q6UWQ5 148 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 FER1L6-AS1Q8NA97 138 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 JKAMPQ9P055 326 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 CELSR3Q9NYQ7 3312 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 P0C879 139 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 LINC01560Q8TB33 94 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 TMEM167AQ8TBQ9 72 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 TGFAP01135 160 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 CKS1BP61024 79 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 MEF2CQ06413 473 aaPredicted RBP10.59□□□□□ -0.71
SEC31A-205ENST00000395310 Q1RN00 199 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 RASL11AQ6T310 242 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 NDUFA4L2Q9NRX3 87 aa10.59□□□□□ -0.71
SEC31A-205ENST00000395310 RNF125Q96EQ8 232 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 TMEM213A2RRL7 107 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 LEPP41159 167 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 TMPRSS3P57727 454 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 PAX2Q02962 417 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 TMEM249Q2WGJ8 235 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 IFI27L1Q96BM0 104 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 TMEM133Q9H2Q1 129 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 IGHV2-70DA0A0C4DH43 119 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 ATG2AQ2TAZ0 1938 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 VPS13AQ96RL7 3174 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 SMIM17P0DL12 118 aa10.58□□□□□ -0.72
SEC31A-205ENST00000395310 SRSF8Q9BRL6 282 aaKnown RBP10.58□□□□□ -0.72
SEC31A-205ENST00000395310 FXYD5Q96DB9 178 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 LRP4O75096 1905 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 ESDP10768 282 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 C1orf229Q6ZS94 237 aaPredicted RBP10.57□□□□□ -0.72
SEC31A-205ENST00000395310 IGFBPL1Q8WX77 278 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 LOC105371242A0A075B767 164 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 A0A0G2JLM5 398 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 E7EUB6 86 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 H7C2G1 150 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 NDUFA3O95167 84 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 HBDP02042 147 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 TMEM30BQ3MIR4 351 aa10.57□□□□□ -0.72
SEC31A-205ENST00000395310 IGLC7A0M8Q6 106 aa10.56□□□□□ -0.72
SEC31A-205ENST00000395310 TOMM40O96008 361 aa10.56□□□□□ -0.72
SEC31A-205ENST00000395310 TMEM78Q5T7P6 136 aa10.56□□□□□ -0.72
SEC31A-205ENST00000395310 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
SEC31A-205ENST00000395310 A0A1B0GWB2 263 aa10.56□□□□□ -0.72
SEC31A-205ENST00000395310 ZNF883P0CG24 379 aa10.56□□□□□ -0.72
SEC31A-205ENST00000395310 KIR3DS1Q14943 382 aa10.56□□□□□ -0.72
SEC31A-205ENST00000395310 Q86TA4 180 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms