RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 SMLR1H3BR10 107 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 MPDU1O75352 247 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 NHLRC4P0CG21 123 aaPredicted RBP14.73□□□□□ -0.05
SNCA-203ENST00000394986 GALR1P47211 349 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 CMC4P56277 68 aaPredicted RBP14.73□□□□□ -0.05
SNCA-203ENST00000394986 GCSAMLQ5JQS6 135 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 PSMG4Q5JS54 123 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 C10orf113Q5VZT2 155 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 Q6ZRG5 221 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 RSG1Q9BU20 258 aa14.73□□□□□ -0.05
SNCA-203ENST00000394986 SOCS3O14543 225 aa14.72□□□□□ -0.05
SNCA-203ENST00000394986 S100A7P31151 101 aa14.72□□□□□ -0.05
SNCA-203ENST00000394986 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.72□□□□□ -0.05
SNCA-203ENST00000394986 TM2D3Q9BRN9 247 aa14.72□□□□□ -0.05
SNCA-203ENST00000394986 RETNQ9HD89 108 aa14.72□□□□□ -0.05
SNCA-203ENST00000394986 KNCNA6PVL3 124 aa14.71□□□□□ -0.05
SNCA-203ENST00000394986 AQP10Q96PS8 301 aa14.71□□□□□ -0.05
SNCA-203ENST00000394986 DNAJC4Q9NNZ3 241 aa14.71□□□□□ -0.05
SNCA-203ENST00000394986 ELOA3CA0A087WX78 387 aaPredicted RBP14.7□□□□□ -0.06
SNCA-203ENST00000394986 OR1L4Q8NGR5 311 aa14.7□□□□□ -0.06
SNCA-203ENST00000394986 GPR82Q96P67 336 aa14.7□□□□□ -0.06
SNCA-203ENST00000394986 RFNGQ9Y644 331 aa14.7□□□□□ -0.06
SNCA-203ENST00000394986 TRAV5A0A0B4J249 113 aa14.69□□□□□ -0.06
SNCA-203ENST00000394986 RNF222A6NCQ9 220 aa14.69□□□□□ -0.06
SNCA-203ENST00000394986 IFNA5P01569 189 aa14.69□□□□□ -0.06
SNCA-203ENST00000394986 SNRPCP09234 159 aaKnown RBP14.69□□□□□ -0.06
SNCA-203ENST00000394986 RPL7P18124 248 aaKnown RBP14.69□□□□□ -0.06
SNCA-203ENST00000394986 DEFB1P60022 68 aa14.69□□□□□ -0.06
SNCA-203ENST00000394986 SNRPD3P62318 126 aaKnown RBP14.69□□□□□ -0.06
SNCA-203ENST00000394986 S100A7AQ86SG5 101 aa14.69□□□□□ -0.06
SNCA-203ENST00000394986 TENM3Q9P273 2699 aa14.68□□□□□ -0.06
SNCA-203ENST00000394986 MRPS12O15235 138 aaKnown RBP14.68□□□□□ -0.06
SNCA-203ENST00000394986 ATF4P18848 351 aaPredicted RBP14.68□□□□□ -0.06
SNCA-203ENST00000394986 ZNF709Q8N972 641 aa14.68□□□□□ -0.06
SNCA-203ENST00000394986 LINC00052Q96N35 136 aa14.68□□□□□ -0.06
SNCA-203ENST00000394986 PFDN5Q99471 154 aa14.68□□□□□ -0.06
SNCA-203ENST00000394986 ZMAT4Q9H898 229 aa14.68□□□□□ -0.06
SNCA-203ENST00000394986 TNFSF18Q9UNG2 199 aa14.68□□□□□ -0.06
SNCA-203ENST00000394986 U3KQK5 164 aa14.68□□□□□ -0.06
SNCA-203ENST00000394986 ACTL10Q5JWF8 245 aa14.67□□□□□ -0.06
SNCA-203ENST00000394986 IGFL4Q6B9Z1 124 aa14.67□□□□□ -0.06
SNCA-203ENST00000394986 SCGB1C1Q8TD33 95 aa14.67□□□□□ -0.06
SNCA-203ENST00000394986 C16orf92Q96LL3 132 aa14.67□□□□□ -0.06
SNCA-203ENST00000394986 C20orf173Q96LM9 149 aa14.67□□□□□ -0.06
SNCA-203ENST00000394986 RCHY1Q96PM5 261 aa14.67□□□□□ -0.06
SNCA-203ENST00000394986 SPATA25Q9BR10 227 aa14.67□□□□□ -0.06
SNCA-203ENST00000394986 C17orf112F2Z3M2 114 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 PSMB3P49720 205 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 MEOX2P50222 304 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 SPATA31B1PQ5VZV4 182 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 Q6ZNX1 250 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 STHQ8IWL8 128 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 INO80EQ8NBZ0 244 aaPredicted RBP14.66□□□□□ -0.06
SNCA-203ENST00000394986 SEPSECSQ9HD40 501 aaKnown RBP14.66□□□□□ -0.06
SNCA-203ENST00000394986 NBEAL2Q6ZNJ1 2754 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 TRAV8-2A0A0B4J237 113 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 H3BTX0 84 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 ISLRO14498 428 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 ID1P41134 155 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 APOC4P55056 127 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 GATAD1Q8WUU5 269 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 PARD6GQ9BYG4 376 aaPredicted RBP14.66□□□□□ -0.06
SNCA-203ENST00000394986 KCNIP2Q9NS61 270 aa14.66□□□□□ -0.06
SNCA-203ENST00000394986 A0A087X0K7 114 aa14.65□□□□□ -0.06
SNCA-203ENST00000394986 FFAR4Q5NUL3 377 aa14.65□□□□□ -0.06
SNCA-203ENST00000394986 GDF5OSQ5U4N7 250 aa14.65□□□□□ -0.06
SNCA-203ENST00000394986 FAM78BQ5VT40 261 aa14.65□□□□□ -0.06
SNCA-203ENST00000394986 BPIFA4PQ86YQ2 179 aa14.65□□□□□ -0.06
SNCA-203ENST00000394986 RNF182Q8N6D2 247 aa14.65□□□□□ -0.06
SNCA-203ENST00000394986 ARPC5O15511 151 aa14.64□□□□□ -0.07
SNCA-203ENST00000394986 HLA-DMBP28068 263 aa14.64□□□□□ -0.07
SNCA-203ENST00000394986 DEFB135Q30KP9 77 aa14.64□□□□□ -0.07
SNCA-203ENST00000394986 MIR17HGQ75NE6 70 aa14.64□□□□□ -0.07
SNCA-203ENST00000394986 TRPT1Q86TN4 253 aaKnown RBP14.64□□□□□ -0.07
SNCA-203ENST00000394986 RNF24Q9Y225 148 aa14.64□□□□□ -0.07
SNCA-203ENST00000394986 STAB2Q8WWQ8 2551 aa14.64□□□□□ -0.07
SNCA-203ENST00000394986 hCG_2014768A0A024R1R8 64 aa14.63□□□□□ -0.07
SNCA-203ENST00000394986 KIR2DL5BA0A0G2JN68 375 aa14.63□□□□□ -0.07
SNCA-203ENST00000394986 KIR2DL5BA0A0G2JPC4 375 aa14.63□□□□□ -0.07
SNCA-203ENST00000394986 F6UB75 175 aa14.63□□□□□ -0.07
SNCA-203ENST00000394986 PRB4P10163 310 aaPredicted RBP14.63□□□□□ -0.07
SNCA-203ENST00000394986 SAMD13Q5VXD3 122 aa14.63□□□□□ -0.07
SNCA-203ENST00000394986 KIR2DL5AQ8N109 375 aa14.63□□□□□ -0.07
SNCA-203ENST00000394986 HSD17B11Q8NBQ5 300 aa14.63□□□□□ -0.07
SNCA-203ENST00000394986 KIR2DL5BQ8NHK3 375 aa14.63□□□□□ -0.07
SNCA-203ENST00000394986 H3BQ15 152 aa14.62□□□□□ -0.07
SNCA-203ENST00000394986 SLC17A3O00476 420 aa14.62□□□□□ -0.07
SNCA-203ENST00000394986 IGLC2P0DOY2 106 aa14.62□□□□□ -0.07
SNCA-203ENST00000394986 ZNF266Q14584 549 aa14.62□□□□□ -0.07
SNCA-203ENST00000394986 OR11H4Q8NGC9 324 aa14.62□□□□□ -0.07
SNCA-203ENST00000394986 LRRC20Q8TCA0 184 aa14.62□□□□□ -0.07
SNCA-203ENST00000394986 CSTL1Q9H114 145 aa14.62□□□□□ -0.07
SNCA-203ENST00000394986 EIF3GO75821 320 aaKnown RBP eCLIP14.61□□□□□ -0.07
SNCA-203ENST00000394986 PYYP10082 97 aa14.61□□□□□ -0.07
SNCA-203ENST00000394986 RPL7L1Q6DKI1 246 aaKnown RBP14.61□□□□□ -0.07
SNCA-203ENST00000394986 SLC25A2Q9BXI2 301 aa14.61□□□□□ -0.07
SNCA-203ENST00000394986 SAV1Q9H4B6 383 aaPredicted RBP14.61□□□□□ -0.07
SNCA-203ENST00000394986 H3BMM0 161 aa14.6□□□□□ -0.07
SNCA-203ENST00000394986 CA1P00915 261 aaPredicted RBP14.6□□□□□ -0.07
SNCA-203ENST00000394986 IGKV3-20P01619 116 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms