RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 OR4A5Q8NH83 315 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 IGHV3OR16-13A0A075B7E8 117 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 IGHV3-74A0A0B4J1X5 117 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 TCRAP04437 139 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 PRSS3P2Q8NHM4 247 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 ZNF596Q8TC21 504 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 TIMD4Q96H15 378 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 C17orf77Q96MU5 243 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 SCNM1Q9BWG6 230 aa8.44□□□□□ -1.06
ACTN1-203ENST00000394419 C20orf202A1L168 122 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 B9A039 149 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 LEPROTL1O95214 131 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 IGLV2-23P01705 113 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 TEX43Q6ZNM6 134 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 BUB1B-PAK6H3BSN5 160 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 SNAI2O43623 268 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 Q6ZVH6 145 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 BPIFA4PQ86YQ2 179 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 TEX45Q8NA69 505 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 C8orf46Q8TAG6 207 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 SLC25A39Q9BZJ4 359 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-203ENST00000394419 LPAR2Q9HBW0 351 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 DOPEY2Q9Y3R5 2298 aa8.43□□□□□ -1.06
ACTN1-203ENST00000394419 SIAH2O43255 324 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 GDF5OSQ5U4N7 250 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 LINC00322Q6ZN03 302 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-203ENST00000394419 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.42□□□□□ -1.06
ACTN1-203ENST00000394419 CSN1S1P47710 185 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 COMPP49747 757 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-203ENST00000394419 C3orf36Q3SXR2 165 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 SAPCD1Q5SSQ6 148 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 IGFL4Q6B9Z1 124 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 COL12A1Q99715 3063 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 C20orf144Q9BQM9 153 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 AAMDCQ9H7C9 122 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 F11RQ9Y624 299 aaKnown RBP8.42□□□□□ -1.06
ACTN1-203ENST00000394419 SHISA9B4DS77 424 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 ZNF672Q499Z4 452 aaPredicted RBP8.42□□□□□ -1.06
ACTN1-203ENST00000394419 TMUB1Q9BVT8 246 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 LAMTOR2Q9Y2Q5 125 aa8.42□□□□□ -1.06
ACTN1-203ENST00000394419 FAM181BA6NEQ2 426 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 FA2HQ7L5A8 372 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 TRGV9Q99603 122 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 OR4C46A6NHA9 309 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 LIPFP07098 398 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 PTTG1IPP53801 180 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 FXYD7P58549 80 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 ZNF841Q6ZN19 808 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 RBPMS2Q6ZRY4 209 aaKnown RBP8.41□□□□□ -1.06
ACTN1-203ENST00000394419 TMEM70Q9BUB7 260 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 HIVEP3Q5T1R4 2406 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 IGHV3-49A0A0A0MS15 119 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 VAMP3Q15836 100 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 Q8NA96 180 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 OR8A1Q8NGG7 326 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 FMC1Q96HJ9 113 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 ALKBH7Q9BT30 221 aaPredicted RBP8.41□□□□□ -1.06
ACTN1-203ENST00000394419 LINC00574Q9H8X3 128 aa8.41□□□□□ -1.06
ACTN1-203ENST00000394419 CSMD1Q96PZ7 3565 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 IGHV3-66A0A0C4DH42 116 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 hDV102S1A0JD36 115 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 OR2J3O76001 311 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 RNASE8Q8TDE3 154 aaKnown RBP8.4□□□□□ -1.06
ACTN1-203ENST00000394419 RAB1BQ9H0U4 201 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 TP73-AS1Q9UF72 201 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 FAM208BQ5VWN6 2430 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 ECSCRQ19T08 205 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 EBLN2Q6P2I7 272 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 UNQ5815/PRO19632Q6UWF5 114 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 THAP8Q8NA92 274 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 DPM3Q9P2X0 92 aa8.4□□□□□ -1.06
ACTN1-203ENST00000394419 LOC102724200A0A096LPH7 203 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-203ENST00000394419 PSMB11A5LHX3 300 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 TCF15Q12870 199 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 LINC00173Q6ZV60 143 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 ACACBO00763 2458 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 OR2T8A6NH00 312 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 IGLC2P0DOY2 106 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 IGLC3P0DOY3 106 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 Q71RC1 249 aaPredicted RBP8.39□□□□□ -1.07
ACTN1-203ENST00000394419 LINC00311Q8N616 119 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 RNF125Q96EQ8 232 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 HLA-DRB1P01911 266 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 LINC00614P0C842 121 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 IGLC1P0CG04 106 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 CEACAM3P40198 252 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 WFDC3Q8IUB2 231 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 TMEM116Q8NCL8 245 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 GTSF1Q8WW33 167 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 MAP1LC3CQ9BXW4 147 aa8.39□□□□□ -1.07
ACTN1-203ENST00000394419 ZNF785A8K8V0 405 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 VWC2LB2RUY7 222 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 ORM1P02763 201 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 ARMS2P0C7Q2 107 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 STPG4Q8N801 248 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 OTORQ9NRC9 128 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 SELENOKQ9Y6D0 94 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 LOC105371242A0A075B767 164 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 A0A1B0GUT8 65 aa8.38□□□□□ -1.07
ACTN1-203ENST00000394419 NBR2O15453 112 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms