RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 OVOL3O00110 214 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 ATP6V0E1O15342 81 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 GGCTO75223 188 aaKnown RBP8.77□□□□□ -1.01
TCOF1-203ENST00000394269 AMY1AP04745 511 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 GPR183P32249 361 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 PAX2Q02962 417 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 IGFL4Q6B9Z1 124 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 Q8N9W7 124 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 STXBP6Q8NFX7 210 aa8.77□□□□□ -1.01
TCOF1-203ENST00000394269 S100A8P05109 93 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 GOLT1AQ6ZVE7 132 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 OR1L6Q8NGR2 347 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 THYN1Q9P016 225 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 SNURFLB1AK76 121 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 PHOX2AO14813 284 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 ZNF207O43670 478 aaKnown RBP8.76□□□□□ -1.01
TCOF1-203ENST00000394269 IGHV4-38-2P0DP08 117 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 C15orf32Q32M92 178 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 PRNTQ86SH4 94 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 IL36BQ9NZH7 164 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 TMEM8BA6NDV4 472 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 C9JCJ5 164 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 ZNF586Q9NXT0 402 aa8.76□□□□□ -1.01
TCOF1-203ENST00000394269 M0R3E3 92 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 CLEC3BP05452 202 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 CD99P14209 185 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 RPL15P61313 204 aaKnown RBP8.75□□□□□ -1.01
TCOF1-203ENST00000394269 USF2Q15853 346 aaPredicted RBP8.75□□□□□ -1.01
TCOF1-203ENST00000394269 ZNF491Q8N8L2 437 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 PYGO2Q9BRQ0 406 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 NAT8BQ9UHF3 227 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 SELENOKQ9Y6D0 94 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 V9GYV3 84 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 SMAD7O15105 426 aaKnown RBP8.75□□□□□ -1.01
TCOF1-203ENST00000394269 CAMPP49913 170 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 FOXL1Q12952 345 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 BPIFA4PQ86YQ2 179 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 HIST3H2BBQ8N257 126 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 OR4F17Q8NGA8 305 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 CHRDL1Q9BU40 450 aa8.75□□□□□ -1.01
TCOF1-203ENST00000394269 RHOGP84095 191 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 HIF1ANQ9NWT6 349 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 PITPNC1Q9UKF7 332 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 TGOLN2O43493 480 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 GATCO43716 136 aaKnown RBP8.74□□□□□ -1.01
TCOF1-203ENST00000394269 IGLV2-8P01709 118 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 GP9P14770 177 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 CLEC19AQ6UXS0 136 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 BTF3L4Q96K17 158 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 PACRGQ96M98 296 aaPredicted RBP8.74□□□□□ -1.01
TCOF1-203ENST00000394269 CDC42EP3Q9UKI2 254 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 ADMP35318 185 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 TMEM256Q8N2U0 113 aa8.74□□□□□ -1.01
TCOF1-203ENST00000394269 IGLV11-55A0A075B6I3 123 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 OOSP1A8MZH6 123 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 EGR2P11161 476 aaPredicted RBP8.73□□□□□ -1.01
TCOF1-203ENST00000394269 CIARTQ8N365 385 aaPredicted RBP8.73□□□□□ -1.01
TCOF1-203ENST00000394269 NUDT10Q8NFP7 164 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 C10orf105Q8TEF2 133 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 DAZAP1Q96EP5 407 aaKnown RBP8.73□□□□□ -1.01
TCOF1-203ENST00000394269 NUDT11Q96G61 164 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 TCEAL7Q9BRU2 100 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 TPPP3Q9BW30 176 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 MRPL18Q9H0U6 180 aaKnown RBP8.73□□□□□ -1.01
TCOF1-203ENST00000394269 TBL2Q9Y4P3 447 aaKnown RBP8.73□□□□□ -1.01
TCOF1-203ENST00000394269 FBN2P35556 2912 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 ACTL10Q5JWF8 245 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 PRDM13Q9H4Q3 707 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 GCGP01275 180 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 TCRAP04437 139 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 HIST1H1EP10412 219 aaKnown RBP8.73□□□□□ -1.01
TCOF1-203ENST00000394269 Q8N6K4 173 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 SVIPQ8NHG7 77 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 AJUBAQ96IF1 538 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
TCOF1-203ENST00000394269 CD33P20138 364 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 LCNL1Q6ZST4 164 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 TTC9CQ8N5M4 171 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 C5orf17Q8NAS9 161 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 IGF2BP2-AS1Q96M15 143 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 NOL4LQ96MY1 436 aaPredicted RBP8.72□□□□□ -1.01
TCOF1-203ENST00000394269 MRPL27Q9P0M9 148 aaKnown RBP8.72□□□□□ -1.01
TCOF1-203ENST00000394269 H3BUX3 64 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 GZMBP10144 247 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 COX6B1P14854 86 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 TAS2R60P59551 318 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 PVRIGQ6DKI7 326 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 TCF24Q7RTU0 167 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 BAGE3Q86Y29 109 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 ATG101Q9BSB4 218 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 ARL2-SNX15V9GYD0 113 aa8.72□□□□□ -1.01
TCOF1-203ENST00000394269 IGHV1-69DA0A0B4J2H0 117 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 NPIPB5A8MRT5 1133 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 IGHV1-69P01742 117 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 HLA-DRB1P01911 266 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 TMEM68Q96MH6 324 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 SRSF8Q9BRL6 282 aaKnown RBP8.71□□□□□ -1.01
TCOF1-203ENST00000394269 SHANK2-AS3Q9BTD1 123 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 TOMM40O96008 361 aa8.71□□□□□ -1.01
TCOF1-203ENST00000394269 IGHV3-11P01762 117 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms