RNA–Protein interactions for RNA: ENST00000393083.2

PTN-202, Transcript of pleiotrophin, humanhuman

TSL 5 BASIC

Gene PTN, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-202ENST00000393083 C11orf94C9JXX5 98 aa10.44□□□□□ -0.74
PTN-202ENST00000393083 PPP5D1E7EU14 171 aa10.44□□□□□ -0.74
PTN-202ENST00000393083 IGHV3-11P01762 117 aa10.44□□□□□ -0.74
PTN-202ENST00000393083 PSMB8P28062 276 aa10.44□□□□□ -0.74
PTN-202ENST00000393083 LEMD1Q68G75 181 aa10.44□□□□□ -0.74
PTN-202ENST00000393083 RNF152Q8N8N0 203 aa10.44□□□□□ -0.74
PTN-202ENST00000393083 OR51M1Q9H341 326 aa10.44□□□□□ -0.74
PTN-202ENST00000393083 YTHDF2Q9Y5A9 579 aaKnown RBP10.44□□□□□ -0.74
PTN-202ENST00000393083 FAM74A7A6NL05 159 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 ARL3P36405 182 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 RELQ04864 619 aaPredicted RBP10.43□□□□□ -0.74
PTN-202ENST00000393083 FOXE3Q13461 319 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 GUCA2BQ16661 112 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 SOHLH1Q5JUK2 328 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 TEX38Q6PEX7 206 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 S100A7AQ86SG5 101 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 NDUFA11Q86Y39 141 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 CCDC28AQ8IWP9 274 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 STXBP6Q8NFX7 210 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 ZNF414Q96IQ9 312 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 SHANK2-AS3Q9BTD1 123 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 ARL2-SNX15V9GYD0 113 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.43□□□□□ -0.74
PTN-202ENST00000393083 BMPR1BO00238 502 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 GP9P14770 177 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 TOMM20LQ6UXN7 152 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 SVBPQ8N300 66 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 SUN5Q8TC36 379 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 FXYD5Q96DB9 178 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 TXNDC17Q9BRA2 123 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 ZFAND3Q9H8U3 227 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 RABAC1Q9UI14 185 aa10.43□□□□□ -0.74
PTN-202ENST00000393083 NDUFS6O75380 124 aaKnown RBP10.42□□□□□ -0.74
PTN-202ENST00000393083 TRBV12-3P01733 135 aa10.42□□□□□ -0.74
PTN-202ENST00000393083 ELANEP08246 267 aa10.42□□□□□ -0.74
PTN-202ENST00000393083 PRR31Q5SQ13 230 aa10.42□□□□□ -0.74
PTN-202ENST00000393083 FAM90A2PQ658T7 463 aa10.42□□□□□ -0.74
PTN-202ENST00000393083 ZNF343Q6P1L6 599 aa10.42□□□□□ -0.74
PTN-202ENST00000393083 TSSC4Q9Y5U2 329 aaPredicted RBP10.42□□□□□ -0.74
PTN-202ENST00000393083 IGHV3OR16-8A0A075B7F1 116 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 F6UZH7 168 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 TMEM250H0YL14 139 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 M0QZ24 198 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 PDE6DO43924 150 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 RPLP1P05386 114 aaKnown RBP10.41□□□□□ -0.74
PTN-202ENST00000393083 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 MYOZ3Q8TDC0 251 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 TMEM14CQ9P0S9 112 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 CMYA5Q8N3K9 4069 aa10.41□□□□□ -0.74
PTN-202ENST00000393083 A0A1W2PRE2 83 aa10.4□□□□□ -0.74
PTN-202ENST00000393083 ZNF98A6NK75 572 aa10.4□□□□□ -0.74
PTN-202ENST00000393083 S100A7P31151 101 aa10.4□□□□□ -0.74
PTN-202ENST00000393083 RPUSD4Q96CM3 377 aaKnown RBP10.4□□□□□ -0.74
PTN-202ENST00000393083 VWFP04275 2813 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 A0A1W2PRX2 142 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 SCO1O75880 301 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 SNAPINO95295 136 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 SNRPCP09234 159 aaKnown RBP10.39□□□□□ -0.75
PTN-202ENST00000393083 FAM209BQ5JX69 171 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 C18orf65Q6ZTR6 163 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 BPIFA4PQ86YQ2 179 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 BLNKQ8WV28 456 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 OR5B12Q96R08 314 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 WNK1Q9H4A3 2382 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 SCO2A0A1W2PP80 73 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 GGTLC3B5MD39 225 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 NBEAP1P0C6P0 100 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 ZNF674Q2M3X9 581 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 KHDC1LQ5JSQ8 128 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 ATRAIDQ6UW56 229 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 OR4F17Q8NGA8 305 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 SMIM7Q9BQ49 75 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 C20orf24Q9BUV8 137 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 NKX6-2Q9C056 277 aaPredicted RBP10.39□□□□□ -0.75
PTN-202ENST00000393083 PARLQ9H300 379 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 PEF1Q9UBV8 284 aaKnown RBP10.39□□□□□ -0.75
PTN-202ENST00000393083 RNF24Q9Y225 148 aa10.39□□□□□ -0.75
PTN-202ENST00000393083 ZNF727A8MUV8 499 aa10.38□□□□□ -0.75
PTN-202ENST00000393083 H3BQ15 152 aa10.38□□□□□ -0.75
PTN-202ENST00000393083 H3BTX0 84 aa10.38□□□□□ -0.75
PTN-202ENST00000393083 NDUFA4O00483 81 aa10.38□□□□□ -0.75
PTN-202ENST00000393083 GGCTO75223 188 aaKnown RBP10.38□□□□□ -0.75
PTN-202ENST00000393083 HIST1H1EP10412 219 aaKnown RBP10.38□□□□□ -0.75
PTN-202ENST00000393083 CDX1P47902 265 aaPredicted RBP10.38□□□□□ -0.75
PTN-202ENST00000393083 CLRN3Q8NCR9 226 aa10.38□□□□□ -0.75
PTN-202ENST00000393083 METTL26Q96S19 204 aa10.38□□□□□ -0.75
PTN-202ENST00000393083 NIPSNAP3BQ9BS92 247 aa10.38□□□□□ -0.75
PTN-202ENST00000393083 M0R036 132 aa10.37□□□□□ -0.75
PTN-202ENST00000393083 MRPS12O15235 138 aaKnown RBP10.37□□□□□ -0.75
PTN-202ENST00000393083 ZNF207O43670 478 aaKnown RBP10.37□□□□□ -0.75
PTN-202ENST00000393083 NPPCP23582 126 aa10.37□□□□□ -0.75
PTN-202ENST00000393083 SUMO1P63165 101 aaKnown RBP10.37□□□□□ -0.75
PTN-202ENST00000393083 C11orf52Q96A22 123 aa10.37□□□□□ -0.75
PTN-202ENST00000393083 ZNF586Q9NXT0 402 aa10.37□□□□□ -0.75
PTN-202ENST00000393083 PKD1L1Q8TDX9 2849 aa10.37□□□□□ -0.75
PTN-202ENST00000393083 NDUFB4O95168 129 aa10.36□□□□□ -0.75
PTN-202ENST00000393083 LGALS1P09382 135 aaKnown RBP10.36□□□□□ -0.75
PTN-202ENST00000393083 IGLC2P0DOY2 106 aa10.36□□□□□ -0.75
PTN-202ENST00000393083 RPL7P18124 248 aaKnown RBP10.36□□□□□ -0.75
PTN-202ENST00000393083 RANP62826 216 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms