RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 RLFQ13129 1914 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 NDUFB1O75438 58 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 MPV17L2Q567V2 206 aa12.23□□□□□ -0.45
CCDC50-201ENST00000392455 RNASE6Q93091 150 aaKnown RBP12.23□□□□□ -0.45
CCDC50-201ENST00000392455 NYNRINQ9P2P1 1898 aaKnown RBP12.22□□□□□ -0.45
CCDC50-201ENST00000392455 CRYBA2P53672 197 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 PTPRQQ9UMZ3 2332 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 MRPL14Q6P1L8 145 aaKnown RBP12.22□□□□□ -0.45
CCDC50-201ENST00000392455 ZNF525Q8N782 197 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 TRBV25-1A0A075B6N4 114 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 A0A1B0GTI1 187 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 FCN3O75636 299 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 NBL1P41271 181 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 SLAQ13239 276 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 AGMATQ9BSE5 352 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 THSD7AQ9UPZ6 1657 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 CFPP27918 469 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 SUPT4H1P63272 117 aaKnown RBP12.22□□□□□ -0.45
CCDC50-201ENST00000392455 C4orf51C9J302 202 aa12.22□□□□□ -0.45
CCDC50-201ENST00000392455 BVES-AS1Q5T3Y7 98 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 C1QTNF5Q9BXJ0 243 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 SPG11Q96JI7 2443 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 IGHV3-64A0A075B6Q5 118 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 D6R8Y8 96 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 EFNB3Q15768 340 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 C1orf43Q9BWL3 253 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 C22orf46C9J442 243 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 TIAF1O95411 115 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 RIF1Q5UIP0 2472 aaKnown RBP12.21□□□□□ -0.45
CCDC50-201ENST00000392455 SYS1-DBNDD2H3BUS1 97 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 BSPH1Q075Z2 132 aa12.21□□□□□ -0.45
CCDC50-201ENST00000392455 ERVH48-1M5A8F1 160 aa12.21□□□□□ -0.46
CCDC50-201ENST00000392455 NPC2P61916 151 aa12.21□□□□□ -0.46
CCDC50-201ENST00000392455 C17orf100A8MU93 164 aa12.21□□□□□ -0.46
CCDC50-201ENST00000392455 FOXG1P55316 489 aaPredicted RBP12.21□□□□□ -0.46
CCDC50-201ENST00000392455 ANKRD29Q8N6D5 301 aa12.21□□□□□ -0.46
CCDC50-201ENST00000392455 ATP5G3P48201 142 aa12.21□□□□□ -0.46
CCDC50-201ENST00000392455 SMIM2Q9BVW6 85 aa12.21□□□□□ -0.46
CCDC50-201ENST00000392455 CD33P20138 364 aa12.2□□□□□ -0.46
CCDC50-201ENST00000392455 LCTP09848 1927 aa12.2□□□□□ -0.46
CCDC50-201ENST00000392455 C12orf77C9JDV5 145 aa12.2□□□□□ -0.46
CCDC50-201ENST00000392455 HAMPP81172 84 aa12.2□□□□□ -0.46
CCDC50-201ENST00000392455 C1orf159Q96HA4 380 aa12.2□□□□□ -0.46
CCDC50-201ENST00000392455 CSTL1Q9H114 145 aa12.2□□□□□ -0.46
CCDC50-201ENST00000392455 SIGLEC12Q96PQ1 595 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 MBNL3Q9NUK0 354 aaKnown RBP12.19□□□□□ -0.46
CCDC50-201ENST00000392455 A0A1W2PPI3 338 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 HLA-DMBP28068 263 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 GFI1BQ5VTD9 330 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 C18orf12Q96KH6 178 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 IMMP1LQ96LU5 166 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 ZNF497Q6ZNH5 498 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 ATP6V0BQ99437 205 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 IGHV1-24A0A0C4DH33 117 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 C5orf47Q569G3 176 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 C20orf204Q6ZNR8 217 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 A0A0U1RRA0 63 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 SAP30O75446 220 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 APOC4P55056 127 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 LIME1Q9H400 295 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 PRDM6Q9NQX0 595 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 LSM4Q9Y4Z0 139 aaKnown RBP12.19□□□□□ -0.46
CCDC50-201ENST00000392455 PLXNA2O75051 1894 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 K7EMI3 77 aa12.19□□□□□ -0.46
CCDC50-201ENST00000392455 SRRM4A7MD48 611 aaKnown RBP12.19□□□□□ -0.46
CCDC50-201ENST00000392455 PLXNB3Q9ULL4 1909 aa12.18□□□□□ -0.46
CCDC50-201ENST00000392455 SAA2-SAA4A0A096LPE2 208 aa12.18□□□□□ -0.46
CCDC50-201ENST00000392455 SAA2P0DJI9 122 aaPredicted RBP12.18□□□□□ -0.46
CCDC50-201ENST00000392455 FAM27E3Q08E93 113 aa12.18□□□□□ -0.46
CCDC50-201ENST00000392455 ANAPC1Q9H1A4 1944 aa12.18□□□□□ -0.46
CCDC50-201ENST00000392455 EIF4EBP2Q13542 120 aaPredicted RBP12.18□□□□□ -0.46
CCDC50-201ENST00000392455 ZNF625Q96I27 306 aaPredicted RBP12.18□□□□□ -0.46
CCDC50-201ENST00000392455 TRBV6-7A0A0A0MS04 114 aa12.18□□□□□ -0.46
CCDC50-201ENST00000392455 E9PQ18 207 aa12.18□□□□□ -0.46
CCDC50-201ENST00000392455 FAM231BA6NCW3 169 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 RFPL3SP0C7P2 107 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 F6UB75 175 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 GLMPQ8WWB7 406 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
CCDC50-201ENST00000392455 CFHR2P36980 270 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 KLF5Q13887 457 aaPredicted RBP12.17□□□□□ -0.46
CCDC50-201ENST00000392455 MUC21A0A0G2JKD1 596 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 MUC21A0A140T8X8 626 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 CELA3AP09093 270 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 PSG3Q16557 428 aa12.17□□□□□ -0.46
CCDC50-201ENST00000392455 I3L3M4 83 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 IGHG2P01859 326 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 NPIPB5A8MRT5 1133 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 SMIM10L1P0DMW3 83 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 MPZP25189 248 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 MORN2Q502X0 79 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 SMIM10Q96HG1 83 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 KIAA1549Q9HCM3 1950 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 TAL2Q16559 108 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 NRXN2Q9P2S2 1712 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 C17orf98A8MV24 154 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 F8VVB4 439 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 F8VWA3 439 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 FRMPD3Q5JV73 1810 aa12.16□□□□□ -0.46
CCDC50-201ENST00000392455 TRAV25A0A0B4J276 109 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms