RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 HTN3P15516 51 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 ANXA7P20073 488 aaKnown RBP11.81□□□□□ -0.52
PTPRK-208ENST00000392449 RRAS2P62070 204 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-208ENST00000392449 FGL1Q08830 312 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 OR4D5Q8NGN0 318 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 SDHCQ99643 169 aaPredicted RBP11.81□□□□□ -0.52
PTPRK-208ENST00000392449 PSENENQ9NZ42 101 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 GOLT1BQ9Y3E0 138 aa11.81□□□□□ -0.52
PTPRK-208ENST00000392449 LOC102723971A0A1B0GUV8 181 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 TMEM189A5PLL7 270 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 PMS2P5A8MQ11 134 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 M0R2Z0 102 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 CFDP00746 253 aaPredicted RBP11.8□□□□□ -0.52
PTPRK-208ENST00000392449 BTCP35070 178 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 MEOX2P50222 304 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 UBE2MP61081 183 aaKnown RBP11.8□□□□□ -0.52
PTPRK-208ENST00000392449 SPATA31B1PQ5VZV4 182 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 TRIQKQ629K1 86 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 CYP2G1PQ6ZSU1 146 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 TMEM144Q7Z5S9 345 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 POM121L12Q8N7R1 296 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 UHRF2Q96PU4 802 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 SLC45A2Q9UMX9 530 aa11.8□□□□□ -0.52
PTPRK-208ENST00000392449 YTHDF2Q9Y5A9 579 aaKnown RBP11.8□□□□□ -0.52
PTPRK-208ENST00000392449 PKHD1P08F94 4074 aa11.79□□□□□ -0.52
PTPRK-208ENST00000392449 H3BRN7 92 aa11.79□□□□□ -0.52
PTPRK-208ENST00000392449 HBE1P02100 147 aa11.79□□□□□ -0.52
PTPRK-208ENST00000392449 IL5P05113 134 aa11.79□□□□□ -0.52
PTPRK-208ENST00000392449 OR4E1P0C645 316 aa11.79□□□□□ -0.52
PTPRK-208ENST00000392449 INPP1P49441 399 aa11.79□□□□□ -0.52
PTPRK-208ENST00000392449 CNN1P51911 297 aaKnown RBP11.79□□□□□ -0.52
PTPRK-208ENST00000392449 SPINK13Q1W4C9 94 aa11.79□□□□□ -0.52
PTPRK-208ENST00000392449 NIPSNAP3BQ9BS92 247 aa11.79□□□□□ -0.52
PTPRK-208ENST00000392449 SLC25A39Q9BZJ4 359 aaPredicted RBP11.79□□□□□ -0.52
PTPRK-208ENST00000392449 A8MTW9 85 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 SCGB1D2O95969 90 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 METTL15P1P0C7V9 234 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 LINC00869P0C866 280 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 P0DMU3 169 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 FAM231AP0DMU4 169 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 FAM231CP0DMU5 169 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 OR11H7Q8NGC8 314 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 SHANK2-AS3Q9BTD1 123 aa11.78□□□□□ -0.52
PTPRK-208ENST00000392449 DNAH17Q9UFH2 4485 aa11.77□□□□□ -0.52
PTPRK-208ENST00000392449 RRN3P1Q2M238 152 aa11.77□□□□□ -0.52
PTPRK-208ENST00000392449 C4orf46Q504U0 113 aa11.77□□□□□ -0.52
PTPRK-208ENST00000392449 SAMD13Q5VXD3 122 aa11.77□□□□□ -0.52
PTPRK-208ENST00000392449 BAP18Q8IXM2 172 aa11.77□□□□□ -0.52
PTPRK-208ENST00000392449 TMEM208Q9BTX3 173 aa11.77□□□□□ -0.52
PTPRK-208ENST00000392449 HIGD1AQ9Y241 93 aa11.77□□□□□ -0.52
PTPRK-208ENST00000392449 IGLV2-18A0A075B6J9 118 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 TRAV12-2A0A075B6T6 113 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 ZNF705GA8MUZ8 300 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-208ENST00000392449 CRXO43186 299 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-208ENST00000392449 OR5G3P0C626 314 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 SLC38A11Q08AI6 406 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 SMIM8Q96KF7 97 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 IGF2BP2-AS1Q96M15 143 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 NAP1L6A6NFF2 107 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 HYPMO75409 117 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 IFNA21P01568 189 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 SNRPCP09234 159 aaKnown RBP11.76□□□□□ -0.53
PTPRK-208ENST00000392449 RAP2BP61225 183 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 IAH1Q2TAA2 248 aaPredicted RBP11.76□□□□□ -0.53
PTPRK-208ENST00000392449 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 PATE2Q6UY27 113 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 ZNF738Q8NE65 137 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 GPR82Q96P67 336 aa11.76□□□□□ -0.53
PTPRK-208ENST00000392449 RCL1Q9Y2P8 373 aaKnown RBP11.76□□□□□ -0.53
PTPRK-208ENST00000392449 RTL8CO15255 209 aa11.75□□□□□ -0.53
PTPRK-208ENST00000392449 ARL16Q0P5N6 197 aa11.75□□□□□ -0.53
PTPRK-208ENST00000392449 TMEM88Q6PEY1 159 aa11.75□□□□□ -0.53
PTPRK-208ENST00000392449 UBE2DNLQ8IWF7 75 aa11.75□□□□□ -0.53
PTPRK-208ENST00000392449 ARL6Q9H0F7 186 aa11.75□□□□□ -0.53
PTPRK-208ENST00000392449 GSKIPQ9P0R6 139 aa11.75□□□□□ -0.53
PTPRK-208ENST00000392449 PCLOQ9Y6V0 5065 aa11.74□□□□□ -0.53
PTPRK-208ENST00000392449 A0A1B0GVY2 172 aa11.74□□□□□ -0.53
PTPRK-208ENST00000392449 ZNF701M0R085 212 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-208ENST00000392449 CCSO14618 274 aa11.74□□□□□ -0.53
PTPRK-208ENST00000392449 INSP01308 110 aa11.74□□□□□ -0.53
PTPRK-208ENST00000392449 IL7P13232 177 aa11.74□□□□□ -0.53
PTPRK-208ENST00000392449 DAD1P61803 113 aa11.74□□□□□ -0.53
PTPRK-208ENST00000392449 DLK1P80370 383 aa11.74□□□□□ -0.53
PTPRK-208ENST00000392449 HIST1H1AQ02539 215 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-208ENST00000392449 ZBTB8BQ8NAP8 495 aaPredicted RBP11.74□□□□□ -0.53
PTPRK-208ENST00000392449 NACAE9PAV3 2078 aa11.73□□□□□ -0.53
PTPRK-208ENST00000392449 TEX48A0A1B0GUV7 120 aa11.73□□□□□ -0.53
PTPRK-208ENST00000392449 DUSP14O95147 198 aaKnown RBP11.73□□□□□ -0.53
PTPRK-208ENST00000392449 RPL7P18124 248 aaKnown RBP11.73□□□□□ -0.53
PTPRK-208ENST00000392449 CXCL3P19876 107 aa11.73□□□□□ -0.53
PTPRK-208ENST00000392449 AZU1P20160 251 aa11.73□□□□□ -0.53
PTPRK-208ENST00000392449 PLP1P60201 277 aa11.73□□□□□ -0.53
PTPRK-208ENST00000392449 FCN2Q15485 313 aa11.73□□□□□ -0.53
PTPRK-208ENST00000392449 PKD1P98161 4303 aa11.72□□□□□ -0.53
PTPRK-208ENST00000392449 MBPP02686 304 aaPredicted RBP11.72□□□□□ -0.53
PTPRK-208ENST00000392449 LINC00336Q6ZUF6 198 aa11.72□□□□□ -0.53
PTPRK-208ENST00000392449 OR10P1Q8NGE3 313 aa11.72□□□□□ -0.53
PTPRK-208ENST00000392449 ARV1Q9H2C2 271 aa11.72□□□□□ -0.53
PTPRK-208ENST00000392449 NPVFQ9HCQ7 196 aa11.72□□□□□ -0.53
PTPRK-208ENST00000392449 A0A087X0K7 114 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms