RNA–Protein interactions for RNA: ENST00000391941.6

ERCC2-201, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC2, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-201ENST00000391941 HTR1DP28221 377 aa14.36□□□□□ -0.11
ERCC2-201ENST00000391941 TEX36Q5VZQ5 186 aa14.36□□□□□ -0.11
ERCC2-201ENST00000391941 DEFB124Q8NES8 71 aa14.36□□□□□ -0.11
ERCC2-201ENST00000391941 PERPQ96FX8 193 aa14.36□□□□□ -0.11
ERCC2-201ENST00000391941 CTSZQ9UBR2 303 aa14.36□□□□□ -0.11
ERCC2-201ENST00000391941 A8MWL6 223 aa14.35□□□□□ -0.11
ERCC2-201ENST00000391941 SLC25A34Q6PIV7 304 aa14.35□□□□□ -0.11
ERCC2-201ENST00000391941 PRSS22Q9GZN4 317 aa14.35□□□□□ -0.11
ERCC2-201ENST00000391941 LYNX1G3V0Z9 82 aa14.35□□□□□ -0.11
ERCC2-201ENST00000391941 LYNX1P0DP58 116 aa14.35□□□□□ -0.11
ERCC2-201ENST00000391941 VSTM2AQ8TAG5 236 aa14.35□□□□□ -0.11
ERCC2-201ENST00000391941 C19orf71A6NCJ1 209 aa14.34□□□□□ -0.11
ERCC2-201ENST00000391941 PPIAL4DF5H284 164 aa14.34□□□□□ -0.11
ERCC2-201ENST00000391941 M0R3E3 92 aa14.34□□□□□ -0.11
ERCC2-201ENST00000391941 RBP4P02753 201 aa14.34□□□□□ -0.11
ERCC2-201ENST00000391941 ZADH2Q8N4Q0 377 aa14.34□□□□□ -0.11
ERCC2-201ENST00000391941 DEFB123Q8N688 67 aa14.34□□□□□ -0.11
ERCC2-201ENST00000391941 PRSS33Q8NF86 280 aa14.34□□□□□ -0.11
ERCC2-201ENST00000391941 LTAP01374 205 aa14.34□□□□□ -0.11
ERCC2-201ENST00000391941 APOHP02749 345 aaPredicted RBP14.34□□□□□ -0.11
ERCC2-201ENST00000391941 CRXO43186 299 aaPredicted RBP14.33□□□□□ -0.11
ERCC2-201ENST00000391941 PSG9Q00887 426 aa14.33□□□□□ -0.11
ERCC2-201ENST00000391941 RBPMS2Q6ZRY4 209 aaKnown RBP14.33□□□□□ -0.11
ERCC2-201ENST00000391941 OR8A1Q8NGG7 326 aa14.33□□□□□ -0.11
ERCC2-201ENST00000391941 VPS25Q9BRG1 176 aa14.33□□□□□ -0.11
ERCC2-201ENST00000391941 TNFRSF1AP19438 455 aa14.33□□□□□ -0.12
ERCC2-201ENST00000391941 KLF17Q5JT82 389 aaPredicted RBP14.33□□□□□ -0.12
ERCC2-201ENST00000391941 STXBP6Q8NFX7 210 aa14.33□□□□□ -0.12
ERCC2-201ENST00000391941 HILPDAQ9Y5L2 63 aa14.33□□□□□ -0.12
ERCC2-201ENST00000391941 OR4A5Q8NH83 315 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 SCRT2Q9NQ03 307 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 SERTM2A0A1B0GWG4 89 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 ARF6P62330 175 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 PRSS57Q6UWY2 283 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 Q86TA4 180 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 C5orf17Q8NAS9 161 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 MAP1LC3CQ9BXW4 147 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 ST20Q9HBF5 79 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 MAP1AP78559 2803 aaPredicted RBP14.32□□□□□ -0.12
ERCC2-201ENST00000391941 CEP295Q9C0D2 2601 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 IGLV2-11P01706 119 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 LRRC10Q5BKY1 277 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 FBXL15Q9H469 300 aa14.32□□□□□ -0.12
ERCC2-201ENST00000391941 IGHV3OR16-8A0A075B7F1 116 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 HSBP1L1C9JCN9 74 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 COX7A1P24310 79 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 MEF2CQ06413 473 aaPredicted RBP14.31□□□□□ -0.12
ERCC2-201ENST00000391941 CHCHD1Q96BP2 118 aaKnown RBP14.31□□□□□ -0.12
ERCC2-201ENST00000391941 FMC1Q96HJ9 113 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 CST9LQ9H4G1 147 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 K7EP13 123 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 IFI27P40305 119 aaPredicted RBP14.31□□□□□ -0.12
ERCC2-201ENST00000391941 TM4SF20Q53R12 229 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 NEU4Q8WWR8 484 aaPredicted RBP14.31□□□□□ -0.12
ERCC2-201ENST00000391941 SMIM12Q96EX1 92 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 C8orf49Q96NF6 230 aa14.31□□□□□ -0.12
ERCC2-201ENST00000391941 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.3□□□□□ -0.12
ERCC2-201ENST00000391941 OVOL3O00110 214 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 SAP30O75446 220 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 ADIPOQQ15848 244 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 TMEM191AQ9H0A3 160 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 SPTA1P02549 2419 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 SMKR1H3BMG3 65 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 VMA21Q3ZAQ7 101 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 CT83Q5H943 113 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 FAM162BQ5T6X4 162 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 IGFL4Q6B9Z1 124 aa14.3□□□□□ -0.12
ERCC2-201ENST00000391941 TMEM213A2RRL7 107 aa14.29□□□□□ -0.12
ERCC2-201ENST00000391941 CRYGCP07315 174 aa14.29□□□□□ -0.12
ERCC2-201ENST00000391941 TMEM186Q96B77 213 aa14.29□□□□□ -0.12
ERCC2-201ENST00000391941 CDKN1BP46527 198 aa14.29□□□□□ -0.12
ERCC2-201ENST00000391941 CRIP1P50238 77 aa14.29□□□□□ -0.12
ERCC2-201ENST00000391941 BSPH1Q075Z2 132 aa14.29□□□□□ -0.12
ERCC2-201ENST00000391941 ZNF492Q9P255 531 aa14.29□□□□□ -0.12
ERCC2-201ENST00000391941 CHTOPQ9Y3Y2 248 aaKnown RBP14.29□□□□□ -0.12
ERCC2-201ENST00000391941 PPIAL4EA0A075B759 164 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 PPIAL4FP0DN26 164 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 RPL27AP46776 148 aaKnown RBP14.28□□□□□ -0.12
ERCC2-201ENST00000391941 C2orf91Q6ZV80 131 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 RAB37Q96AX2 223 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 TRGV9Q99603 122 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 SLC25A39Q9BZJ4 359 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-201ENST00000391941 TMEM133Q9H2Q1 129 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 C1RLQ9NZP8 487 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 SOX21Q9Y651 276 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-201ENST00000391941 ZNF292O60281 2723 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 TRAV30A0A087WSZ9 112 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 C17orf100A8MU93 164 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 LOXP28300 417 aaPredicted RBP14.28□□□□□ -0.12
ERCC2-201ENST00000391941 C3orf36Q3SXR2 165 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 DEFB125Q8N687 156 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 PIP4P2Q8N4L2 257 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 PRSS3P2Q8NHM4 247 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 HIGD1AQ9Y241 93 aa14.28□□□□□ -0.12
ERCC2-201ENST00000391941 NDUFB3O43676 98 aa14.27□□□□□ -0.12
ERCC2-201ENST00000391941 LIPFP07098 398 aa14.27□□□□□ -0.12
ERCC2-201ENST00000391941 OR5AL1P0C617 328 aa14.27□□□□□ -0.12
ERCC2-201ENST00000391941 OCIAD2Q56VL3 154 aa14.27□□□□□ -0.12
ERCC2-201ENST00000391941 NDFIP1Q9BT67 221 aa14.27□□□□□ -0.12
ERCC2-201ENST00000391941 CUL9Q8IWT3 2517 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms