RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 ARHGEF11O15085 1522 aa-0.33□□□□□ -2.46
SNORD28B-201ENST00000390993 AHCTF1Q8WYP5 2266 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 PTPRFP10586 1907 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 hCG_1818297A0A087WSY0 165 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 A0A087WSZ3 146 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 TRAV26-2A0A0B4J265 109 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 A8MT66 165 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 HAND1O96004 215 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 C8GP07360 202 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 SMIM17P0DL12 118 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 RAB5CP51148 216 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 ROMO1P60602 79 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 RPL37AP61513 92 aaKnown RBP-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 RPL37P61927 97 aaKnown RBP-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 RANP62826 216 aaKnown RBP-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 C22orf39Q6P5X5 142 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 ALKAL1Q6UXT8 129 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 ARPINQ7Z6K5 226 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 S100A7AQ86SG5 101 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 PDZD9Q8IXQ8 264 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 Q8TAT8 98 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 BORCS7Q96B45 105 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 ADAT3Q96EY9 351 aaPredicted RBP-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 CCDC94Q9BW85 323 aaPredicted RBP-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 DOCK5Q9H7D0 1870 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 ARL5AQ9Y689 179 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 MYH7BA7E2Y1 1941 aa-0.34□□□□□ -2.46
SNORD28B-201ENST00000390993 NEO1Q92859 1461 aa-0.35□□□□□ -2.46
SNORD28B-201ENST00000390993 KPNA3O00505 521 aaPredicted RBP-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 GGCTO75223 188 aaKnown RBP-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 LY6G6CO95867 125 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 TTRP02766 147 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 OMPP47874 163 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 DEFA1P59665 94 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 MAGOHP61326 146 aaKnown RBP-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 COX6A2Q02221 97 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 ACOT6Q3I5F7 207 aaPredicted RBP-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 Q6Q795 121 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 IDO2Q6ZQW0 420 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 LRRC18Q8N456 261 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 OR5D16Q8NGK9 328 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 GRPEL2Q8TAA5 225 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 MRPL27Q9P0M9 148 aaKnown RBP-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 VPS29Q9UBQ0 182 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 PKIGQ9Y2B9 76 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 RTL1A6NKG5 1358 aa-0.35□□□□□ -2.47
SNORD28B-201ENST00000390993 SCN8AQ9UQD0 1980 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 FAM208BQ5VWN6 2430 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 WRNQ14191 1432 aaPredicted RBP eCLIP-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 ERBINQ96RT1 1412 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 F8P00451 2351 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 LYRM1O43325 122 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 IGHV3-33P01772 117 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 RNASE4P34096 147 aaKnown RBP-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 SERPINB9P50453 376 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 MYL6P60660 151 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 UBE2BP63146 152 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 OR2F1Q13607 317 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 IAH1Q2TAA2 248 aaPredicted RBP-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 C1orf134Q5TEV5 83 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 XAF1Q6GPH4 301 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 IFT20Q8IY31 132 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 CNPY4Q8N129 248 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 SLC25A40Q8TBP6 338 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 ATP6V1G3Q96LB4 118 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 HYLS1Q96M11 299 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 AP1S3Q96PC3 154 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 TRIM4Q9C037 500 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 TMEM126AQ9H061 195 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 TMEM133Q9H2Q1 129 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 POPDC3Q9HBV1 291 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 ENY2Q9NPA8 101 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 NKIRAS1Q9NYS0 192 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 GLTPQ9NZD2 209 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 RFX7Q2KHR2 1363 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 KMT2AQ03164 3969 aa-0.36□□□□□ -2.47
SNORD28B-201ENST00000390993 PLXNA4Q9HCM2 1894 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 ARHGEF28Q8N1W1 1705 aaKnown RBP-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 A0A0J9YY99 117 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 hADV38S2A0JD32 116 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 SMIM23A6NLE4 172 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 A6NN06 94 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 M0R036 132 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 IFNA4P05014 189 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 SERPINA6P08185 405 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 HIST1H1EP10412 219 aaKnown RBP-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 HLA-EP13747 358 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 PDE6GP18545 87 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 EVI2AP22794 236 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 RPS3P23396 243 aaKnown RBP eCLIP-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 SRIP30626 198 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 ETV6P41212 452 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 TMED1Q13445 227 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 RRN3P1Q2M238 152 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 PATE2Q6UY27 113 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 TMEM86BQ8N661 226 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 OR4K15Q8NH41 348 aa-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 POP5Q969H6 163 aaKnown RBP-0.37□□□□□ -2.47
SNORD28B-201ENST00000390993 PTH2Q96A98 100 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms