RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TMEM30BQ3MIR4 351 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 LCN12Q6JVE5 192 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 PPP1R27Q86WC6 154 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 RASL11BQ9BPW5 248 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 C19orf24Q9BVV8 132 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 CLEC7AQ9BXN2 247 aa9.68□□□□□ -0.86
CAPRIN1-202ENST00000389645 FAM208BQ5VWN6 2430 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 OR2T8A6NH00 312 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 HIGD1CA8MV81 97 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 C19orf84I3L1E1 186 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 LGALS7P47929 136 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 TMEM155Q4W5P6 130 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 AMMECR1LQ6DCA0 310 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 PRNTQ86SH4 94 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 RCHY1Q96PM5 261 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 C20orf144Q9BQM9 153 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 NAA38Q9BRA0 125 aaKnown RBP9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 C2CD3Q4AC94 2353 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 SNAI2O43623 268 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 IGHV3-23P01764 117 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 YPEL3P61236 119 aaPredicted RBP9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 CX3CL1P78423 397 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 FAM167A-AS1Q96KT0 104 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 PGLYRP4Q96LB8 373 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 OSTCQ9NRP0 149 aa9.67□□□□□ -0.86
CAPRIN1-202ENST00000389645 PRB1P04280 392 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 AMY1AP04745 511 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 CSN3P07498 182 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 PDLIM4P50479 330 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 KLRD1Q13241 179 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 SRSF12Q8WXF0 261 aaKnown RBP9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 IGHV1-3A0A0C4DH29 117 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 PPBPP02775 128 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 PAFAH1B2P68402 229 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 GOLT1AQ6ZVE7 132 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 EXOC3-AS1Q8N2X6 119 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 CDC42EP3Q9UKI2 254 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 COL8A1P27658 744 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 OR8B3Q8NGG8 313 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 ITLN2Q8WWU7 325 aaPredicted RBP9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 TNFRSF14Q92956 283 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 OR8B2Q96RD0 313 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 NRN1Q9NPD7 142 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 FBXL7Q9UJT9 491 aa9.66□□□□□ -0.86
CAPRIN1-202ENST00000389645 LRRK2Q5S007 2527 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 CELSR2Q9HCU4 2923 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 TMSB15BA0A087X1C1 80 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 CGB1A6NKQ9 187 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 TIMM23O14925 209 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 P01737 135 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 ATP5IP56385 69 aaPredicted RBP9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 SLAQ13239 276 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 HIGD1AQ9Y241 93 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 SIGLEC9Q9Y336 463 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 HLA-DQA1P01909 254 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 HIST1H1EP10412 219 aaKnown RBP9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 Q56UQ5 140 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 ZNF329Q86UD4 541 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 TP53TG3Q9ULZ0 132 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
CAPRIN1-202ENST00000389645 CELSR1Q9NYQ6 3014 aa9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGHV2-70DA0A0C4DH43 119 aa9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 FNDC10F2Z333 226 aa9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 TNFRSF13BO14836 293 aaPredicted RBP9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 NDUFS7O75251 213 aa9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGLV2-23P01705 113 aa9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 MT-ND6P03923 174 aa9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 GNB1LQ9BYB4 327 aa9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 CSMD2Q7Z408 3487 aa9.65□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGLC7A0M8Q6 106 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 M0R2Z0 102 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 PMCHL1Q16048 86 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 TEX43Q6ZNM6 134 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 TMEM136Q6ZRR5 245 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 Q9H3A6 140 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 SONP18583 2426 aaKnown RBP9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 BMPR1BO00238 502 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 CHEK1O14757 476 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 TIMD4Q96H15 378 aa9.64□□□□□ -0.87
CAPRIN1-202ENST00000389645 MUC21A0A0G2JKD1 596 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 MUC21A0A140T8X8 626 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 ZNF207O43670 478 aaKnown RBP9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 FCGR2BP31994 310 aaPredicted RBP9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 MUC21Q5SSG8 566 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 OR1N2Q8NGR9 330 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 FXYD5Q96DB9 178 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGKV1D-37A0A075B6S9 117 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 BUB1B-PAK6H3BSN5 160 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 COMPP49747 757 aaPredicted RBP9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 CIARTQ8N365 385 aaPredicted RBP9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 STXBP6Q8NFX7 210 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 PMCHL2Q9BQD1 86 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 LINC00574Q9H8X3 128 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 UQCR10Q9UDW1 63 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 IZUMO1RA6ND01 250 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 IGLV2-8P01709 118 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 IL4P05112 153 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 HTR1DP28221 377 aa9.63□□□□□ -0.87
CAPRIN1-202ENST00000389645 SMAGPQ0VAQ4 97 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms