RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CR1LQ2VPA4 569 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 RASL11AQ6T310 242 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 RELNP78509 3460 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 COX8AP10176 69 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 LOXL1Q08397 574 aaPredicted RBP11.13□□□□□ -0.63
SDC1-202ENST00000381150 TIMM23BQ5SRD1 257 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 GCSAMQ8N6F7 178 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 ASH1LQ9NR48 2969 aaKnown RBP11.13□□□□□ -0.63
SDC1-202ENST00000381150 FAM90A9PA6NNJ1 464 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 C22orf34Q6ZV56 151 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 PCP2Q8IVA1 136 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 ITLN1Q8WWA0 313 aa11.13□□□□□ -0.63
SDC1-202ENST00000381150 K7ERJ3 54 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 LHBP01229 141 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 FAM90A1Q86YD7 464 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 MRPL32Q9BYC8 188 aaKnown RBP11.12□□□□□ -0.63
SDC1-202ENST00000381150 PPIAL4CA0A0B4J2A2 164 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 DLL1O00548 723 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 PPIAL4GP0DN37 164 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 FABP2P12104 132 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 C2orf91Q6ZV80 131 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 FXYD5Q96DB9 178 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 MRPL20Q9BYC9 149 aaKnown RBP11.12□□□□□ -0.63
SDC1-202ENST00000381150 ACACAQ13085 2346 aa11.12□□□□□ -0.63
SDC1-202ENST00000381150 M0R1B8 84 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 Q9H3A6 140 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 DSCAMO60469 2012 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 C9orf118A6NHY6 69 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 SLC25A17O43808 307 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 CT45A6P0DMU7 189 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 CT45A5P0DMU8 189 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 CT45A7P0DMV0 189 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 C3orf36Q3SXR2 165 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 FAM231DQ6ZW35 169 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 ATP5L2Q7Z4Y8 100 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 OR1L8Q8NGR8 309 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 C19orf24Q9BVV8 132 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 SEC11AP67812 179 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 PRSS33Q8NF86 280 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 DDB2Q92466 427 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 MS4A6AQ9H2W1 248 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 C1RLQ9NZP8 487 aa11.11□□□□□ -0.63
SDC1-202ENST00000381150 IGLV3-9A0A075B6K5 115 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 A0A1B0GXF2 115 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 G3V4G9 280 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 SMKR1H3BMG3 65 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 GLRXP35754 106 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 MZT1Q08AG7 82 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 OR10X1Q8NGY0 326 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 DSCAML1Q8TD84 2053 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 KBTBD11-OT1A0A1B0GTJ5 212 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 CGB3P0DN86 165 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 CGB7P0DN87 165 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 AZU1P20160 251 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 NEU4Q8WWR8 484 aaPredicted RBP11.1□□□□□ -0.63
SDC1-202ENST00000381150 CLUHP3Q96NS8 147 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 CCL3L1P16619 93 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 C17orf58Q2M2W7 97 aa11.1□□□□□ -0.63
SDC1-202ENST00000381150 ZCCHC24Q8N2G6 241 aaKnown RBP11.1□□□□□ -0.63
SDC1-202ENST00000381150 A0A1B0GUT8 65 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 K7EP34 96 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 WT1-ASQ06250 92 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 DIAPH2-AS1Q14236 149 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 C2orf83Q53S99 150 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 ZNF788Q6ZQV5 615 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 VSTM2AQ8TAG5 236 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 ZNF747Q9BV97 191 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 CRXO43186 299 aaPredicted RBP11.09□□□□□ -0.63
SDC1-202ENST00000381150 RBP4P02753 201 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 RUSC1-AS1Q66K80 236 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 LCNL1Q6ZST4 164 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 S4R3C0 116 aa11.09□□□□□ -0.63
SDC1-202ENST00000381150 TCRBV4S1A1TA0A5B7 111 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 D6R8Y8 96 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 NHP2Q9NX24 153 aaKnown RBP11.08□□□□□ -0.64
SDC1-202ENST00000381150 TCRAP04437 139 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 SUB1P53999 127 aaKnown RBP eCLIP11.08□□□□□ -0.64
SDC1-202ENST00000381150 SAMD5Q5TGI4 173 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 F2RL2O00254 374 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 PSG3Q16557 428 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 FAM222BQ8WU58 562 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 ZNF414Q96IQ9 312 aa11.08□□□□□ -0.64
SDC1-202ENST00000381150 GATA4P43694 442 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 DLX1P56177 255 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 AMN1Q8IY45 258 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 TPSG1Q9NRR2 321 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 PPIAL4EA0A075B759 164 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 PRSS1P07477 247 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 PPIAL4FP0DN26 164 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 CCL8P80075 99 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 FAM27E3Q08E93 113 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 LINC01545Q5VT33 79 aa11.07□□□□□ -0.64
SDC1-202ENST00000381150 TSSC4Q9Y5U2 329 aaPredicted RBP11.07□□□□□ -0.64
SDC1-202ENST00000381150 TMEM213A2RRL7 107 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 H3BRM9 83 aa11.06□□□□□ -0.64
SDC1-202ENST00000381150 FCGR2BP31994 310 aaPredicted RBP11.06□□□□□ -0.64
SDC1-202ENST00000381150 RIGQ13278 110 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms