RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.29■□□□□ 0.2
U2AF1-202ENST00000380276 BAP18Q8IXM2 172 aa16.29■□□□□ 0.2
U2AF1-202ENST00000380276 RNF182Q8N6D2 247 aa16.29■□□□□ 0.2
U2AF1-202ENST00000380276 OR11H7Q8NGC8 314 aa16.29■□□□□ 0.2
U2AF1-202ENST00000380276 LYRM9A8MSI8 78 aa16.28■□□□□ 0.2
U2AF1-202ENST00000380276 WRBO00258 174 aa16.28■□□□□ 0.2
U2AF1-202ENST00000380276 MED6O75586 246 aa16.28■□□□□ 0.2
U2AF1-202ENST00000380276 S100A7P31151 101 aa16.28■□□□□ 0.2
U2AF1-202ENST00000380276 ZNF738Q8NE65 137 aa16.28■□□□□ 0.2
U2AF1-202ENST00000380276 TRAV12-2A0A075B6T6 113 aa16.27■□□□□ 0.2
U2AF1-202ENST00000380276 DUXBA0A1W2PPF3 345 aa16.27■□□□□ 0.2
U2AF1-202ENST00000380276 A8MTW9 85 aa16.27■□□□□ 0.2
U2AF1-202ENST00000380276 ALDH3B2P48448 385 aa16.27■□□□□ 0.2
U2AF1-202ENST00000380276 CIB3Q96Q77 187 aaPredicted RBP16.27■□□□□ 0.2
U2AF1-202ENST00000380276 PPP1R14DQ9NXH3 145 aa16.27■□□□□ 0.2
U2AF1-202ENST00000380276 SLC45A2Q9UMX9 530 aa16.27■□□□□ 0.2
U2AF1-202ENST00000380276 PITX3O75364 302 aa16.26■□□□□ 0.19
U2AF1-202ENST00000380276 RHOBP62745 196 aa16.26■□□□□ 0.19
U2AF1-202ENST00000380276 FCN2Q15485 313 aa16.26■□□□□ 0.19
U2AF1-202ENST00000380276 SPANXN5Q5MJ07 72 aa16.26■□□□□ 0.19
U2AF1-202ENST00000380276 GPR82Q96P67 336 aa16.26■□□□□ 0.19
U2AF1-202ENST00000380276 MRPS26Q9BYN8 205 aaKnown RBP16.26■□□□□ 0.19
U2AF1-202ENST00000380276 SLC25A39Q9BZJ4 359 aaPredicted RBP16.26■□□□□ 0.19
U2AF1-202ENST00000380276 NBDYA0A0U1RRE5 68 aa16.25■□□□□ 0.19
U2AF1-202ENST00000380276 SMCO3A2RU48 225 aa16.25■□□□□ 0.19
U2AF1-202ENST00000380276 H3BP45 60 aa16.25■□□□□ 0.19
U2AF1-202ENST00000380276 CRXO43186 299 aaPredicted RBP16.25■□□□□ 0.19
U2AF1-202ENST00000380276 HTN1P15515 57 aa16.25■□□□□ 0.19
U2AF1-202ENST00000380276 FAUP35544 74 aaKnown RBP16.25■□□□□ 0.19
U2AF1-202ENST00000380276 B2MP61769 119 aa16.25■□□□□ 0.19
U2AF1-202ENST00000380276 TMEM182Q6ZP80 229 aaPredicted RBP16.25■□□□□ 0.19
U2AF1-202ENST00000380276 C6orf223Q8N319 242 aa16.25■□□□□ 0.19
U2AF1-202ENST00000380276 OR4D5Q8NGN0 318 aa16.25■□□□□ 0.19
U2AF1-202ENST00000380276 C17orf77Q96MU5 243 aa16.25■□□□□ 0.19
U2AF1-202ENST00000380276 CCDC59Q9P031 241 aaKnown RBP16.25■□□□□ 0.19
U2AF1-202ENST00000380276 FABP12A6NFH5 140 aa16.24■□□□□ 0.19
U2AF1-202ENST00000380276 BOLA2-SMG1P6H3BVE0 249 aa16.24■□□□□ 0.19
U2AF1-202ENST00000380276 SYNGR2O43760 224 aa16.24■□□□□ 0.19
U2AF1-202ENST00000380276 HIST1H1AQ02539 215 aaPredicted RBP16.24■□□□□ 0.19
U2AF1-202ENST00000380276 LINC01587Q99440 93 aa16.24■□□□□ 0.19
U2AF1-202ENST00000380276 TRAV8-2A0A0B4J237 113 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 ATP5G1P05496 136 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 AZU1P20160 251 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 ATP5G3P48201 142 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 CCL18P55774 89 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 RAP2BP61225 183 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 CLINT1Q14677 625 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 TMEM128Q5BJH2 165 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 DYNC2LI1Q8TCX1 351 aa16.23■□□□□ 0.19
U2AF1-202ENST00000380276 HOXB5P09067 269 aa16.22■□□□□ 0.19
U2AF1-202ENST00000380276 PRB4P10163 310 aaPredicted RBP16.22■□□□□ 0.19
U2AF1-202ENST00000380276 ACOT7LQ6ZUV0 252 aa16.22■□□□□ 0.19
U2AF1-202ENST00000380276 MAPKAPK5-AS1Q8N8E1 139 aa16.22■□□□□ 0.19
U2AF1-202ENST00000380276 ZNRF2Q8NHG8 242 aa16.22■□□□□ 0.19
U2AF1-202ENST00000380276 LRRC20Q8TCA0 184 aa16.22■□□□□ 0.19
U2AF1-202ENST00000380276 PRSS46E5RG02 174 aa16.21■□□□□ 0.19
U2AF1-202ENST00000380276 H3BRN7 92 aa16.21■□□□□ 0.19
U2AF1-202ENST00000380276 IL5P05113 134 aa16.21■□□□□ 0.19
U2AF1-202ENST00000380276 SLC25A6P12236 298 aa16.21■□□□□ 0.19
U2AF1-202ENST00000380276 TSPOP30536 169 aa16.21■□□□□ 0.19
U2AF1-202ENST00000380276 HIGD1AQ9Y241 93 aa16.21■□□□□ 0.19
U2AF1-202ENST00000380276 STRAPQ9Y3F4 350 aaKnown RBP16.21■□□□□ 0.19
U2AF1-202ENST00000380276 OR5G3P0C626 314 aa16.2■□□□□ 0.18
U2AF1-202ENST00000380276 CYP2G1PQ6ZSU1 146 aa16.2■□□□□ 0.18
U2AF1-202ENST00000380276 RAB2BQ8WUD1 216 aa16.2■□□□□ 0.18
U2AF1-202ENST00000380276 NOL3O60936 208 aaKnown RBP16.19■□□□□ 0.18
U2AF1-202ENST00000380276 RPL7P18124 248 aaKnown RBP16.19■□□□□ 0.18
U2AF1-202ENST00000380276 TNFSF8P32971 234 aa16.19■□□□□ 0.18
U2AF1-202ENST00000380276 AP3S2P59780 193 aa16.19■□□□□ 0.18
U2AF1-202ENST00000380276 TOMM5Q8N4H5 51 aa16.19■□□□□ 0.18
U2AF1-202ENST00000380276 LRTM2Q8N967 370 aa16.19■□□□□ 0.18
U2AF1-202ENST00000380276 RNF141Q8WVD5 230 aa16.19■□□□□ 0.18
U2AF1-202ENST00000380276 LINC00588Q9Y4M8 146 aa16.19■□□□□ 0.18
U2AF1-202ENST00000380276 PLAC8L1A1L4L8 177 aa16.18■□□□□ 0.18
U2AF1-202ENST00000380276 CBY3A6NI87 242 aa16.18■□□□□ 0.18
U2AF1-202ENST00000380276 SFT2D2O95562 160 aa16.18■□□□□ 0.18
U2AF1-202ENST00000380276 PPP1R1AQ13522 171 aa16.18■□□□□ 0.18
U2AF1-202ENST00000380276 PYDC2Q56P42 97 aa16.18■□□□□ 0.18
U2AF1-202ENST00000380276 OR8A1Q8NGG7 326 aa16.18■□□□□ 0.18
U2AF1-202ENST00000380276 C16orf74Q96GX8 76 aa16.18■□□□□ 0.18
U2AF1-202ENST00000380276 SHANK2-AS3Q9BTD1 123 aa16.18■□□□□ 0.18
U2AF1-202ENST00000380276 HYPMO75409 117 aa16.17■□□□□ 0.18
U2AF1-202ENST00000380276 CDK2AP2O75956 126 aa16.17■□□□□ 0.18
U2AF1-202ENST00000380276 LINC00869P0C866 280 aa16.17■□□□□ 0.18
U2AF1-202ENST00000380276 TAS2R60P59551 318 aa16.17■□□□□ 0.18
U2AF1-202ENST00000380276 TMEM144Q7Z5S9 345 aa16.17■□□□□ 0.18
U2AF1-202ENST00000380276 TMEM256Q8N2U0 113 aa16.17■□□□□ 0.18
U2AF1-202ENST00000380276 MCFD2Q8NI22 146 aa16.17■□□□□ 0.18
U2AF1-202ENST00000380276 UHRF2Q96PU4 802 aa16.17■□□□□ 0.18
U2AF1-202ENST00000380276 TIMM8BQ9Y5J9 83 aaPredicted RBP16.17■□□□□ 0.18
U2AF1-202ENST00000380276 SSX7Q7RTT5 188 aa16.16■□□□□ 0.18
U2AF1-202ENST00000380276 NOP10Q9NPE3 64 aaKnown RBP16.16■□□□□ 0.18
U2AF1-202ENST00000380276 HSPG2P98160 4391 aa16.15■□□□□ 0.18
U2AF1-202ENST00000380276 ANXA7P20073 488 aaKnown RBP16.15■□□□□ 0.18
U2AF1-202ENST00000380276 RRAS2P62070 204 aaPredicted RBP16.15■□□□□ 0.18
U2AF1-202ENST00000380276 OR5I1Q13606 314 aa16.15■□□□□ 0.18
U2AF1-202ENST00000380276 PSG3Q16557 428 aa16.15■□□□□ 0.18
U2AF1-202ENST00000380276 SOSTQ9BQB4 213 aa16.15■□□□□ 0.18
U2AF1-202ENST00000380276 SLC25A21Q9BQT8 299 aaPredicted RBP16.15■□□□□ 0.18
U2AF1-202ENST00000380276 SLIRPQ9GZT3 109 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms