RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ISLRO14498 428 aa15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 FSHBP01225 129 aa15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 PPIFP30405 207 aaKnown RBP15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 FAM3BP58499 235 aaPredicted RBP15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 C5orf17Q8NAS9 161 aa15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 TRBV19A0A075B6N1 114 aa15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 A0A1W2PPQ1 181 aa15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 IER3P46695 156 aa15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 RPH3ALQ9UNE2 315 aa15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 RNF24Q9Y225 148 aa15.41■□□□□ 0.06
PDLIM5-205ENST00000380180 IGHV3OR16-8A0A075B7F1 116 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 GCGP01275 180 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 TRGV3P03979 118 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 ERVFC1-1P60608 527 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 KCNIP4Q6PIL6 250 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 TOMM20LQ6UXN7 152 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 EXOC3-AS1Q8N2X6 119 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 IMMP2LQ96T52 175 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 GNB4Q9HAV0 340 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 OTORQ9NRC9 128 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 RABAC1Q9UI14 185 aa15.4■□□□□ 0.06
PDLIM5-205ENST00000380180 FAM223BA6NKX1 122 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 GGCTO75223 188 aaKnown RBP15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 TRGC2P03986 189 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 CYB5R2Q6BCY4 276 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 FAM223AQ8IWN6 122 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 NHLRC2Q8NBF2 726 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 ATG101Q9BSB4 218 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 SAV1Q9H4B6 383 aaPredicted RBP15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 BIN3Q9NQY0 253 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 BMPR1BO00238 502 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 SLC17A3O00476 420 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 TGOLN2O43493 480 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 MGST1P10620 155 aaKnown RBP15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 FOXL1Q12952 345 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 TMEM183BQ1AE95 376 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 SGK494Q96LW2 274 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 ZFAND3Q9H8U3 227 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 KLF12Q9Y4X4 402 aa15.39■□□□□ 0.05
PDLIM5-205ENST00000380180 AP4M1O00189 453 aa15.38■□□□□ 0.05
PDLIM5-205ENST00000380180 TCRAP04437 139 aa15.38■□□□□ 0.05
PDLIM5-205ENST00000380180 BAGE2Q86Y30 109 aa15.38■□□□□ 0.05
PDLIM5-205ENST00000380180 TPPP2P59282 170 aa15.38■□□□□ 0.05
PDLIM5-205ENST00000380180 UBE2G1P62253 170 aa15.38■□□□□ 0.05
PDLIM5-205ENST00000380180 RNASE7Q9H1E1 156 aaKnown RBP15.38■□□□□ 0.05
PDLIM5-205ENST00000380180 ITPR3Q14573 2671 aa15.37■□□□□ 0.05
PDLIM5-205ENST00000380180 C9orf139Q6ZV77 190 aa15.37■□□□□ 0.05
PDLIM5-205ENST00000380180 SRD5A3Q9H8P0 318 aa15.37■□□□□ 0.05
PDLIM5-205ENST00000380180 V9GYV3 84 aa15.37■□□□□ 0.05
PDLIM5-205ENST00000380180 PPP5D1E7EU14 171 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 BRI3O95415 125 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 S100A6P06703 90 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 RPL15P61313 204 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 SNRPEP62304 92 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 SIGLEC15Q6ZMC9 328 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 WFDC11Q8NEX6 87 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 CMTM2Q8TAZ6 248 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 OSTCQ9NRP0 149 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 MXRA5Q9NR99 2828 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 H3BUA1 57 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 OR8I2Q8N0Y5 310 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 LYPD1Q8N2G4 141 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 ATP6V0BQ99437 205 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 IL36BQ9NZH7 164 aa15.36■□□□□ 0.05
PDLIM5-205ENST00000380180 ZNF469Q96JG9 3925 aaPredicted RBP15.35■□□□□ 0.05
PDLIM5-205ENST00000380180 RPL7P18124 248 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-205ENST00000380180 OR5R1Q8NH85 324 aa15.35■□□□□ 0.05
PDLIM5-205ENST00000380180 FMC1Q96HJ9 113 aa15.35■□□□□ 0.05
PDLIM5-205ENST00000380180 KLK15Q9H2R5 256 aa15.35■□□□□ 0.05
PDLIM5-205ENST00000380180 IBA57Q5T440 356 aaKnown RBP15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 Q6YL49 198 aa15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 CIARTQ8N365 385 aaPredicted RBP15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 CLPSL1A2RUU4 121 aa15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 C5orf52A6NGY3 159 aa15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 S100A9P06702 114 aaKnown RBP15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 PF4V1P10720 104 aa15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 S100A7P31151 101 aa15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 RELQ04864 619 aaPredicted RBP15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 PDE6HQ13956 83 aa15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 GPR82Q96P67 336 aa15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 CCDC168Q8NDH2 2452 aa15.34■□□□□ 0.05
PDLIM5-205ENST00000380180 PHOX2AO14813 284 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 IGLV1-40P01703 118 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 TYMSP04818 313 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 FRZBQ92765 325 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 USMG5Q96IX5 58 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 SMAD5-AS1Q9Y6J3 95 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 PDZD2O15018 2839 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 ZNF320A2RRD8 509 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 TMEM95Q3KNT9 176 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 GOLT1AQ6ZVE7 132 aa15.33■□□□□ 0.04
PDLIM5-205ENST00000380180 BUB3O43684 328 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BKO60814 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BJP06899 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BOP23527 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BBP33778 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 ARL3P36405 182 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BDP58876 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 HIST1H2BCP62807 126 aa15.32■□□□□ 0.04
PDLIM5-205ENST00000380180 CFHR3Q02985 330 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms