RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 FAM106AQ4KMX7 169 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 Q6ZQT7 251 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 FAM19A5Q7Z5A7 132 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-201ENST00000379989 A0A1W2PNU3 283 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-201ENST00000379989 SNCGO76070 127 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 ACTL6BO94805 426 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 LOXL1Q08397 574 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-201ENST00000379989 Q6Q795 121 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 SIGLEC9Q9Y336 463 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 TET2Q6N021 2002 aaPredicted RBP6□□□□□ -1.45
CDKL5-201ENST00000379989 WDFY3Q8IZQ1 3526 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 COL8A1P27658 744 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 ZNF816Q0VGE8 651 aaPredicted RBP6□□□□□ -1.45
CDKL5-201ENST00000379989 TBC1D28Q2M2D7 210 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 SPINK14Q6IE38 97 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 PPP1R27Q86WC6 154 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 ZNF808Q8N4W9 903 aaPredicted RBP6□□□□□ -1.45
CDKL5-201ENST00000379989 DRAM1Q8N682 238 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 C7orf69Q9H7B7 122 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 TMEM167BQ9NRX6 74 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 CNTRLQ7Z7A1 2325 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 MED12Q93074 2177 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 PRSS46E5RG02 174 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 MFAP4P55083 255 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 FGFBP3Q8TAT2 258 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 RASL11BQ9BPW5 248 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 MRPL32Q9BYC8 188 aaKnown RBP6□□□□□ -1.45
CDKL5-201ENST00000379989 SLC25A10Q9UBX3 287 aaPredicted RBP6□□□□□ -1.45
CDKL5-201ENST00000379989 KNTC1P50748 2209 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 PINLYPA6NC86 204 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 MAGEA5P43359 124 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 FGF12P61328 243 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 MRPL23Q16540 153 aaKnown RBP6□□□□□ -1.45
CDKL5-201ENST00000379989 LPAL2Q16609 132 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 MORN3Q6PF18 240 aaPredicted RBP6□□□□□ -1.45
CDKL5-201ENST00000379989 OR9G1Q8NH87 305 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 DLX4Q92988 240 aaPredicted RBP6□□□□□ -1.45
CDKL5-201ENST00000379989 PGLYRP4Q96LB8 373 aa6□□□□□ -1.45
CDKL5-201ENST00000379989 TMEM213A2RRL7 107 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 ZNF414Q96IQ9 312 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 DKK2Q9UBU2 259 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 IGHV3-15A0A0B4J1V0 119 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 NPIPB11E5RHQ5 1161 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 SPRNQ5BIV9 151 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 Q6ZT83 130 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 RPRMLQ8N4K4 120 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 PIFOQ8TCI5 191 aa5.99□□□□□ -1.45
CDKL5-201ENST00000379989 Q6P435 159 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 ZNF474Q6S9Z5 364 aaPredicted RBP5.98□□□□□ -1.45
CDKL5-201ENST00000379989 FAM90A1Q86YD7 464 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 RTL8AQ9BWD3 113 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 PLEKHA3Q9HB20 300 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 ENY2Q9NPA8 101 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 KLF12Q9Y4X4 402 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 KNL1Q8NG31 2342 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 NDUFS7O75251 213 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 UBALD1Q8TB05 177 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 PIGCQ92535 297 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 C21orf62Q9NYP8 219 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 TMSB15BA0A087X1C1 80 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 F5H768 121 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 BRWD1-AS2P59051 145 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 SRYQ05066 204 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 PRSS3P2Q8NHM4 247 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 FAM234AQ9H0X4 552 aa5.98□□□□□ -1.45
CDKL5-201ENST00000379989 J3QT63 122 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 CA6P23280 308 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 FXYD7P58549 80 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 PRR20EP86478 221 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 PRR20CP86479 221 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 PRR20DP86480 221 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 PRR20BP86481 221 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 PRR20AP86496 221 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 ANKRD29Q8N6D5 301 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 TRAV24A0A0B4J272 114 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 IQCF6A8MYZ5 107 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 C9JAW5 83 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 IFI27P40305 119 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-201ENST00000379989 PSMB2P49721 201 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 POU2AF1Q16633 256 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 TMEM30BQ3MIR4 351 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 LINC00322Q6ZN03 302 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-201ENST00000379989 RBPMS2Q6ZRY4 209 aaKnown RBP5.97□□□□□ -1.45
CDKL5-201ENST00000379989 MOB3BQ86TA1 216 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 CIARTQ8N365 385 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-201ENST00000379989 OR10J6PQ8NGY7 276 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 TMEM158Q8WZ71 300 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 RND1Q92730 232 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 TMEM101Q96IK0 257 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 RITA1Q96K30 269 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 RPP21Q9H633 154 aaKnown RBP5.97□□□□□ -1.45
CDKL5-201ENST00000379989 HHLA3Q9XRX5 114 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 HIGD1AQ9Y241 93 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 MBD3L4A6NDZ8 208 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-201ENST00000379989 MBD3L3A6NE82 208 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-201ENST00000379989 MBD3L5A6NJ08 208 aaPredicted RBP5.97□□□□□ -1.45
CDKL5-201ENST00000379989 C17orf98A8MV24 154 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 TM4SF5O14894 197 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 ASIPP42127 132 aa5.97□□□□□ -1.45
CDKL5-201ENST00000379989 H2BFWTQ7Z2G1 175 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms