RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 PRB4P10163 310 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 UCNP55089 124 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 CIARTQ8N365 385 aaPredicted RBP15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 URB1-AS1Q96HZ7 61 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 PGLYRP4Q96LB8 373 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 OTORQ9NRC9 128 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 TMEM14CQ9P0S9 112 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 CNIH1O95406 144 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 IGLV2-11P01706 119 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 HBBP68871 147 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 KLRD1Q13241 179 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 RNASEKQ6P5S7 137 aaKnown RBP15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 LY6G5BQ8NDX9 201 aa15.44■□□□□ 0.06
SHROOM1-202ENST00000378676 RELNP78509 3460 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 HSBP1O75506 76 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 CT83Q5H943 113 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 LCN12Q6JVE5 192 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 GOLT1AQ6ZVE7 132 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 BORCS7Q96B45 105 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 HILPDAQ9Y5L2 63 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 A8MWL6 223 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 LIPFP07098 398 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 ATOH7Q8N100 152 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 C17orf77Q96MU5 243 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 RAXQ9Y2V3 346 aa15.43■□□□□ 0.06
SHROOM1-202ENST00000378676 ARF6P62330 175 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 ORAOV1Q8WV07 137 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 CFHR4Q92496 578 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 RNF5Q99942 180 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 S4R3C0 116 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 TFPI2P48307 235 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 EBLN2Q6P2I7 272 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 PRNTQ86SH4 94 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 ASCL2Q99929 193 aa15.42■□□□□ 0.06
SHROOM1-202ENST00000378676 C20orf202A1L168 122 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 FAM181BA6NEQ2 426 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 M0QZ24 198 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 M0R2Z0 102 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 HOXB4P17483 251 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 RBX1P62877 108 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 FBXL19-AS1Q494R0 122 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 KLF17Q5JT82 389 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 IGF2RP11717 2491 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 NPIPB6E9PJ23 425 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 H3BRN7 92 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 NBR2O15453 112 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 HTR1DP28221 377 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 FOXA3P55318 350 aaPredicted RBP15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 MAJINQ3KP22 176 aa15.41■□□□□ 0.06
SHROOM1-202ENST00000378676 SH2D7A6NKC9 451 aaPredicted RBP15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 ZNF785A8K8V0 405 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 KIR3DL3Q8N743 410 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 DAZAP1Q96EP5 407 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 SRSF8Q9BRL6 282 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 SHANK2-AS3Q9BTD1 123 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 PIEZO1Q92508 2521 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 SPTA1P02549 2419 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 A0A1W2PRD5 423 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 A0A1W2PRF3 423 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 A0A1W2PRM7 423 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 CCL21O00585 134 aa15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 RBPMS2Q6ZRY4 209 aaKnown RBP15.4■□□□□ 0.06
SHROOM1-202ENST00000378676 DPM3Q9P2X0 92 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 UQCR10Q9UDW1 63 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 TRBV19A0A075B6N1 114 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 OVOL3O00110 214 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 IGLC2P0DOY2 106 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 IGLC3P0DOY3 106 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 COL8A1P27658 744 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 SPATA12Q7Z6I5 190 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 BCL6BQ8N143 479 aaPredicted RBP15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 OR11H6Q8NGC7 330 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 GFRA4Q9GZZ7 299 aa15.39■□□□□ 0.05
SHROOM1-202ENST00000378676 PMCHL1Q16048 86 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 ZNF491Q8N8L2 437 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 CLEC5AQ9NY25 188 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 SOX21Q9Y651 276 aaPredicted RBP15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 C2orf70A6NJV1 201 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 K7EP13 123 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 NDUFA3O95167 84 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 NDUFB8O95169 186 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 HLA-DRB1P01911 266 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 FAM120AOSQ5T036 256 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 C16orf54Q6UWD8 224 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 SIGLEC15Q6ZMC9 328 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 RNF125Q96EQ8 232 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 ZC2HC1AQ96GY0 325 aa15.38■□□□□ 0.05
SHROOM1-202ENST00000378676 NBASA2RRP1 2371 aa15.37■□□□□ 0.05
SHROOM1-202ENST00000378676 IL4P05112 153 aa15.37■□□□□ 0.05
SHROOM1-202ENST00000378676 CDKN1BP46527 198 aa15.37■□□□□ 0.05
SHROOM1-202ENST00000378676 ADORA2A-AS1P86434 159 aa15.37■□□□□ 0.05
SHROOM1-202ENST00000378676 BPIFA4PQ86YQ2 179 aa15.37■□□□□ 0.05
SHROOM1-202ENST00000378676 RNASE8Q8TDE3 154 aaKnown RBP15.37■□□□□ 0.05
SHROOM1-202ENST00000378676 ODF3BA8MYP8 253 aa15.36■□□□□ 0.05
SHROOM1-202ENST00000378676 MRPS12O15235 138 aaKnown RBP15.36■□□□□ 0.05
SHROOM1-202ENST00000378676 APOHP02749 345 aaPredicted RBP15.36■□□□□ 0.05
SHROOM1-202ENST00000378676 PTTG1IPP53801 180 aa15.36■□□□□ 0.05
SHROOM1-202ENST00000378676 Q56UQ5 140 aa15.36■□□□□ 0.05
SHROOM1-202ENST00000378676 NPBQ8NG41 125 aa15.36■□□□□ 0.05
SHROOM1-202ENST00000378676 STPG4Q8N801 248 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms