RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 MBD3L1Q8WWY6 194 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 ACTR3CQ9C0K3 210 aaPredicted RBP10.36□□□□□ -0.75
PRPF18-202ENST00000378572 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 ELOA3CA0A087WX78 387 aaPredicted RBP10.36□□□□□ -0.75
PRPF18-202ENST00000378572 TRAV1-1A0A0B4J248 108 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 BMPR1BO00238 502 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 OR5G3P0C626 314 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 RHOBP62745 196 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 GCSAMLQ5JQS6 135 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 Q8WTZ3 238 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 CHRDL1Q9BU40 450 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 MRPL32Q9BYC8 188 aaKnown RBP10.36□□□□□ -0.75
PRPF18-202ENST00000378572 MED9Q9NWA0 146 aa10.36□□□□□ -0.75
PRPF18-202ENST00000378572 PPP5D1E7EU14 171 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 HBE1P02100 147 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 H2AFB1P0C5Y9 115 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 CDC34P49427 236 aaPredicted RBP10.35□□□□□ -0.75
PRPF18-202ENST00000378572 RELQ04864 619 aaPredicted RBP10.35□□□□□ -0.75
PRPF18-202ENST00000378572 ZNF726P1Q15940 193 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 NDUFA5Q16718 116 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 CD300EQ496F6 205 aaPredicted RBP10.35□□□□□ -0.75
PRPF18-202ENST00000378572 FAM122CQ6P4D5 195 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 OR2K2Q8NGT1 345 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 PCNPQ8WW12 178 aaKnown RBP10.35□□□□□ -0.75
PRPF18-202ENST00000378572 DNAJC4Q9NNZ3 241 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 SIGLEC8Q9NYZ4 499 aa10.35□□□□□ -0.75
PRPF18-202ENST00000378572 A0A1W2PPV4 95 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 LINC00862A6NCI5 91 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 TEX46H3BTG2 121 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 COX7A2P2O60397 106 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 TMEM37Q8WXS4 190 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 RAB24Q969Q5 203 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 RNF125Q96EQ8 232 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 ZNF414Q96IQ9 312 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 SELENOKQ9Y6D0 94 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 STARD9Q9P2P6 4700 aa10.34□□□□□ -0.75
PRPF18-202ENST00000378572 HYPMO75409 117 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 ARL3P36405 182 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 FAM78BQ5VT40 261 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 C10orf113Q5VZT2 155 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 PATE2Q6UY27 113 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 DEFB125Q8N687 156 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 SRD5A3Q9H8P0 318 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 SLC25A22Q9H936 323 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 FUT9Q9Y231 359 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 MAP1LC3B2A6NCE7 125 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 IL4P05112 153 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 STAG3L2P0CL84 134 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 STAG3L3P0CL85 134 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 LYZP61626 148 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 S100A7AQ86SG5 101 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 SFT2D1Q8WV19 159 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 MAP1LC3BQ9GZQ8 125 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 WFDC10AQ9H1F0 79 aa10.33□□□□□ -0.76
PRPF18-202ENST00000378572 SEPSECSQ9HD40 501 aaKnown RBP10.33□□□□□ -0.76
PRPF18-202ENST00000378572 MRPL27Q9P0M9 148 aaKnown RBP10.33□□□□□ -0.76
PRPF18-202ENST00000378572 PUS1Q9Y606 427 aaKnown RBP eCLIP10.33□□□□□ -0.76
PRPF18-202ENST00000378572 ZNF320A2RRD8 509 aa10.32□□□□□ -0.76
PRPF18-202ENST00000378572 GGCTO75223 188 aaKnown RBP10.32□□□□□ -0.76
PRPF18-202ENST00000378572 CD7P09564 240 aa10.32□□□□□ -0.76
PRPF18-202ENST00000378572 ORM2P19652 201 aa10.32□□□□□ -0.76
PRPF18-202ENST00000378572 OR1B1Q8NGR6 318 aa10.32□□□□□ -0.76
PRPF18-202ENST00000378572 IL17DQ8TAD2 202 aa10.32□□□□□ -0.76
PRPF18-202ENST00000378572 ZFAND3Q9H8U3 227 aa10.32□□□□□ -0.76
PRPF18-202ENST00000378572 HIGD1AQ9Y241 93 aa10.32□□□□□ -0.76
PRPF18-202ENST00000378572 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 OR11H12B2RN74 326 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 NDUFA4O00483 81 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 FOLR2P14207 255 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 EDN2P20800 178 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 S100A7P31151 101 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 TAS2R45P59539 299 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 PMS2P11Q13670 270 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 TOMM20LQ6UXN7 152 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 HRH4Q9H3N8 390 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 TECRQ9NZ01 308 aaKnown RBP10.31□□□□□ -0.76
PRPF18-202ENST00000378572 DOK5Q9P104 306 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 PFDN2Q9UHV9 154 aa10.31□□□□□ -0.76
PRPF18-202ENST00000378572 C8orf88P0DMB2 117 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 USF2Q15853 346 aaPredicted RBP10.3□□□□□ -0.76
PRPF18-202ENST00000378572 DEFB114Q30KQ6 69 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 LCN15Q6UWW0 184 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 MIR17HGQ75NE6 70 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 PBDC1Q9BVG4 233 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 RNF24Q9Y225 148 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 H3BRN7 92 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 CXorf1O96002 111 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 KHDC3LQ587J8 217 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 SPATA31B1PQ5VZV4 182 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
PRPF18-202ENST00000378572 SLC25A39Q9BZJ4 359 aaPredicted RBP10.3□□□□□ -0.76
PRPF18-202ENST00000378572 LYSTQ99698 3801 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 CSMD3Q7Z407 3707 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 RAB19A4D1S5 217 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 FAM106AQ4KMX7 169 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 GPHB5Q86YW7 130 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
PRPF18-202ENST00000378572 MARC2Q969Z3 335 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms