RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 PROB1E7EW31 1015 aa12.14□□□□□ -0.47
PCDH17-201ENST00000377918 ATP5G3P48201 142 aa12.14□□□□□ -0.47
PCDH17-201ENST00000377918 IGKV1D-16P01601 117 aa12.14□□□□□ -0.47
PCDH17-201ENST00000377918 ADAMTSL5Q6ZMM2 481 aa12.14□□□□□ -0.47
PCDH17-201ENST00000377918 HLA-DMBP28068 263 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 THSD7AQ9UPZ6 1657 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 IGHV3-48P01763 117 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 LOC105371267A0A1B0GV96 52 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 D6R8Y8 96 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 ZNF876PQ49A33 203 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 CELA2BP08218 269 aaPredicted RBP12.13□□□□□ -0.47
PCDH17-201ENST00000377918 FDCSPQ8NFU4 85 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 LEAP2Q969E1 77 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 ANKRD29Q8N6D5 301 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 BVES-AS1Q5T3Y7 98 aa12.13□□□□□ -0.47
PCDH17-201ENST00000377918 hADV29S1A0JD25 119 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 C12orf77C9JDV5 145 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 TCRAP04437 139 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 TGIF1Q15583 401 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 HIST3H2BBQ8N257 126 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 COX6A1P12074 109 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 CFPP27918 469 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 FUSP35637 526 aaKnown RBP eCLIP12.12□□□□□ -0.47
PCDH17-201ENST00000377918 DTX4Q9Y2E6 619 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 TRBV25-1A0A075B6N4 114 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 CHKB-CPT1BH3BT56 60 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 TMEM52Q8NDY8 209 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 ATP6V0BQ99437 205 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 IGHV3-66A0A0C4DH42 116 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 LIME1Q9H400 295 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 HOXB3P14651 431 aaPredicted RBP12.12□□□□□ -0.47
PCDH17-201ENST00000377918 GATA3P23771 443 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 PSG3Q16557 428 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 A0A1B0GTI1 187 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 A0A1W2PQF6 199 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 C20orf204Q6ZNR8 217 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 ZNF114Q8NC26 417 aa12.12□□□□□ -0.47
PCDH17-201ENST00000377918 RTBDNQ9BSG5 229 aaPredicted RBP12.11□□□□□ -0.47
PCDH17-201ENST00000377918 RAMP1O60894 148 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 SUPT4H1P63272 117 aaKnown RBP12.11□□□□□ -0.47
PCDH17-201ENST00000377918 OCC1Q8TAD7 63 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 CTHRC1Q96CG8 243 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 NPC2P61916 151 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 CSTL1Q9H114 145 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 SAA2-SAA4A0A096LPE2 208 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 NPIPB5A8MRT5 1133 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 SAA2P0DJI9 122 aaPredicted RBP12.11□□□□□ -0.47
PCDH17-201ENST00000377918 M0R1W7 72 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 FCN3O75636 299 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 SMAD7O15105 426 aaKnown RBP12.11□□□□□ -0.47
PCDH17-201ENST00000377918 MUC21Q5SSG8 566 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 H3BTX0 84 aa12.11□□□□□ -0.47
PCDH17-201ENST00000377918 FOXG1P55316 489 aaPredicted RBP12.11□□□□□ -0.47
PCDH17-201ENST00000377918 PEBP1P30086 187 aaKnown RBP12.1□□□□□ -0.47
PCDH17-201ENST00000377918 NDUFB8O95169 186 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 NCR2O95944 276 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 IGHV2OR16-5A0A0B4J2B6 119 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 GAGE1Q13065 139 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 KLRD1Q13241 179 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 IGHV3-49A0A0A0MS15 119 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 TAL2Q16559 108 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 C17orf98A8MV24 154 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 APOC4P55056 127 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 TMEM75Q8N9X5 138 aa12.1□□□□□ -0.47
PCDH17-201ENST00000377918 C9orf118A6NHY6 69 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 TRGV1A0A0A0MS02 117 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 GAGE12JA6NER3 117 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 SRRM4A7MD48 611 aaKnown RBP12.09□□□□□ -0.47
PCDH17-201ENST00000377918 MP68P56378 58 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 GAGE4Q13068 117 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 GAGE5Q13069 117 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 GAGE6Q13070 117 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 ZAR1Q86SH2 424 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 CECR9P0C854 216 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 IMMP1LQ96LU5 166 aa12.09□□□□□ -0.47
PCDH17-201ENST00000377918 I3L3M4 83 aa12.08□□□□□ -0.48
PCDH17-201ENST00000377918 NUP35Q8NFH5 326 aa12.08□□□□□ -0.48
PCDH17-201ENST00000377918 SMIM10L1P0DMW3 83 aa12.08□□□□□ -0.48
PCDH17-201ENST00000377918 SMIM10Q96HG1 83 aa12.08□□□□□ -0.48
PCDH17-201ENST00000377918 IGHV3-64A0A075B6Q5 118 aa12.08□□□□□ -0.48
PCDH17-201ENST00000377918 CD33P20138 364 aa12.08□□□□□ -0.48
PCDH17-201ENST00000377918 SIVA1O15304 175 aa12.08□□□□□ -0.48
PCDH17-201ENST00000377918 C15orf32Q32M92 178 aa12.08□□□□□ -0.48
PCDH17-201ENST00000377918 PYY3Q5JQD4 70 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 IL15RAQ13261 267 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 LCN12Q6JVE5 192 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 PRO1854Q9UHT4 67 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 IGHV3-35A0A0C4DH35 117 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 TEX48A0A1B0GUV7 120 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 ATOX1O00244 68 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 WISP3O95389 354 aaPredicted RBP12.07□□□□□ -0.48
PCDH17-201ENST00000377918 LINC01590Q5TEZ4 76 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 SRXN1Q9BYN0 137 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 NDUFS6O75380 124 aaKnown RBP12.07□□□□□ -0.48
PCDH17-201ENST00000377918 LSM4Q9Y4Z0 139 aaKnown RBP12.07□□□□□ -0.48
PCDH17-201ENST00000377918 IGHV3-23P01764 117 aa12.07□□□□□ -0.48
PCDH17-201ENST00000377918 ATP5G1P05496 136 aa12.06□□□□□ -0.48
PCDH17-201ENST00000377918 GLMPQ8WWB7 406 aa12.06□□□□□ -0.48
PCDH17-201ENST00000377918 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms