RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 DNAH11Q96DT5 4516 aa13.14□□□□□ -0.31
HDAC6-202ENST00000376610 SFT2D2O95562 160 aa13.13□□□□□ -0.31
HDAC6-202ENST00000376610 INSP01308 110 aa13.13□□□□□ -0.31
HDAC6-202ENST00000376610 HOXB5P09067 269 aa13.13□□□□□ -0.31
HDAC6-202ENST00000376610 SMCO3A2RU48 225 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 GATA2P23769 480 aaPredicted RBP13.12□□□□□ -0.31
HDAC6-202ENST00000376610 S100A5P33763 92 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 RAP2BP61225 183 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 B2MP61769 119 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 FGL1Q08830 312 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 PPP1R1AQ13522 171 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 TMEM88Q6PEY1 159 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 C15orf53Q8NAA6 179 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 TRIM63Q969Q1 353 aa13.12□□□□□ -0.31
HDAC6-202ENST00000376610 A8MTW9 85 aa13.11□□□□□ -0.31
HDAC6-202ENST00000376610 PRSS46E5RG02 174 aa13.11□□□□□ -0.31
HDAC6-202ENST00000376610 H3BP45 60 aa13.11□□□□□ -0.31
HDAC6-202ENST00000376610 CNN1P51911 297 aaKnown RBP13.11□□□□□ -0.31
HDAC6-202ENST00000376610 ACOT7LQ6ZUV0 252 aa13.11□□□□□ -0.31
HDAC6-202ENST00000376610 S100A7AQ86SG5 101 aa13.11□□□□□ -0.31
HDAC6-202ENST00000376610 MUC4Q99102 2169 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 PKD1P98161 4303 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 LYRM9A8MSI8 78 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 IL5P05113 134 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 RPL7P18124 248 aaKnown RBP13.1□□□□□ -0.31
HDAC6-202ENST00000376610 SPINK13Q1W4C9 94 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 AMTNQ6UX39 209 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 Q6ZR54 194 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 ZNF738Q8NE65 137 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 OR11H7Q8NGC8 314 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 ATG101Q9BSB4 218 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 PPP1R14DQ9NXH3 145 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 HIGD1AQ9Y241 93 aa13.1□□□□□ -0.31
HDAC6-202ENST00000376610 M0R2Z0 102 aa13.09□□□□□ -0.31
HDAC6-202ENST00000376610 FAM3BP58499 235 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-202ENST00000376610 UBE2MP61081 183 aaKnown RBP13.09□□□□□ -0.31
HDAC6-202ENST00000376610 C1orf134Q5TEV5 83 aa13.09□□□□□ -0.31
HDAC6-202ENST00000376610 TMEM144Q7Z5S9 345 aa13.09□□□□□ -0.31
HDAC6-202ENST00000376610 SLC25A39Q9BZJ4 359 aaPredicted RBP13.09□□□□□ -0.31
HDAC6-202ENST00000376610 DYNC1H1Q14204 4646 aaKnown RBP13.09□□□□□ -0.31
HDAC6-202ENST00000376610 NACAE9PAV3 2078 aa13.09□□□□□ -0.31
HDAC6-202ENST00000376610 ZNF705GA8MUZ8 300 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-202ENST00000376610 H3BRN7 92 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 HYPMO75409 117 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 SELENOTP62341 195 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 IGFL4Q6B9Z1 124 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 TMEM182Q6ZP80 229 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-202ENST00000376610 CYP2G1PQ6ZSU1 146 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 RNF182Q8N6D2 247 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 LRRC20Q8TCA0 184 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 C17orf77Q96MU5 243 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 SHANK2-AS3Q9BTD1 123 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 V9GYH0 126 aa13.08□□□□□ -0.32
HDAC6-202ENST00000376610 OR5G3P0C626 314 aa13.07□□□□□ -0.32
HDAC6-202ENST00000376610 DEFB130BP0DP73 79 aa13.07□□□□□ -0.32
HDAC6-202ENST00000376610 DEFB130AP0DP74 79 aa13.07□□□□□ -0.32
HDAC6-202ENST00000376610 INPP1P49441 399 aa13.07□□□□□ -0.32
HDAC6-202ENST00000376610 RHOBP62745 196 aa13.07□□□□□ -0.32
HDAC6-202ENST00000376610 PSENENQ9NZ42 101 aa13.07□□□□□ -0.32
HDAC6-202ENST00000376610 RNF24Q9Y225 148 aa13.07□□□□□ -0.32
HDAC6-202ENST00000376610 RYR1P21817 5038 aa13.06□□□□□ -0.32
HDAC6-202ENST00000376610 TRAV8-2A0A0B4J237 113 aa13.06□□□□□ -0.32
HDAC6-202ENST00000376610 CCDC160A6NGH7 325 aa13.06□□□□□ -0.32
HDAC6-202ENST00000376610 BOLA2-SMG1P6H3BVE0 249 aa13.06□□□□□ -0.32
HDAC6-202ENST00000376610 LINC00869P0C866 280 aa13.06□□□□□ -0.32
HDAC6-202ENST00000376610 TSPOP30536 169 aa13.06□□□□□ -0.32
HDAC6-202ENST00000376610 HIST1H1AQ02539 215 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-202ENST00000376610 BAP18Q8IXM2 172 aa13.06□□□□□ -0.32
HDAC6-202ENST00000376610 F5H768 121 aa13.05□□□□□ -0.32
HDAC6-202ENST00000376610 CRXO43186 299 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-202ENST00000376610 SSSCA1O60232 199 aa13.05□□□□□ -0.32
HDAC6-202ENST00000376610 POLR2GP62487 172 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC6-202ENST00000376610 ID3Q02535 119 aa13.05□□□□□ -0.32
HDAC6-202ENST00000376610 TMEM256Q8N2U0 113 aa13.05□□□□□ -0.32
HDAC6-202ENST00000376610 LINC01587Q99440 93 aa13.05□□□□□ -0.32
HDAC6-202ENST00000376610 TRAV12-2A0A075B6T6 113 aa13.04□□□□□ -0.32
HDAC6-202ENST00000376610 C9orf170A2RU37 121 aa13.04□□□□□ -0.32
HDAC6-202ENST00000376610 ADAP1O75689 374 aa13.04□□□□□ -0.32
HDAC6-202ENST00000376610 SPANXN2Q5MJ10 180 aa13.04□□□□□ -0.32
HDAC6-202ENST00000376610 OR8A1Q8NGG7 326 aa13.04□□□□□ -0.32
HDAC6-202ENST00000376610 MGAT4CQ9UBM8 478 aa13.04□□□□□ -0.32
HDAC6-202ENST00000376610 NUDT3O95989 172 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 ATP5G1P05496 136 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 ANXA7P20073 488 aaKnown RBP13.03□□□□□ -0.32
HDAC6-202ENST00000376610 ATP5G3P48201 142 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 PLP1P60201 277 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 RRAS2P62070 204 aaPredicted RBP13.03□□□□□ -0.32
HDAC6-202ENST00000376610 DLK1P80370 383 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 PSG3Q16557 428 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 SMIM8Q96KF7 97 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 UHRF2Q96PU4 802 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 ARL6Q9H0F7 186 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 NPVFQ9HCQ7 196 aa13.03□□□□□ -0.32
HDAC6-202ENST00000376610 A0A087X0K7 114 aa13.02□□□□□ -0.33
HDAC6-202ENST00000376610 NAP1L6A6NFF2 107 aa13.02□□□□□ -0.33
HDAC6-202ENST00000376610 PRM2P04554 102 aa13.02□□□□□ -0.33
HDAC6-202ENST00000376610 HTN1P15515 57 aa13.02□□□□□ -0.33
HDAC6-202ENST00000376610 CXCL3P19876 107 aa13.02□□□□□ -0.33
HDAC6-202ENST00000376610 TAS2R60P59551 318 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms