RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 ZNF106Q9H2Y7 1883 aaKnown RBP8.35□□□□□ -1.07
PTCH1-204ENST00000375290 CSTL1Q9H114 145 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 CCL21O00585 134 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 SELLP14151 372 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 BVES-AS1Q5T3Y7 98 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 Q6P435 159 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 MAFAQ8NHW3 353 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-204ENST00000375290 RBAKDNA6NC62 111 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 AKIRIN1Q9H9L7 192 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-204ENST00000375290 HIGD1BQ9P298 99 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 LYZL1Q6UWQ5 148 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 Q6ZWC4 215 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 MED12Q93074 2177 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 H0YJW9 148 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 ZNF474Q6S9Z5 364 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-204ENST00000375290 PHF3Q92576 2039 aaKnown RBP8.34□□□□□ -1.07
PTCH1-204ENST00000375290 HTN1P15515 57 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 CFHR2P36980 270 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 PAX8Q06710 450 aa8.34□□□□□ -1.07
PTCH1-204ENST00000375290 NUP210Q8TEM1 1887 aaPredicted RBP8.34□□□□□ -1.07
PTCH1-204ENST00000375290 VOPP1Q96AW1 172 aa8.34□□□□□ -1.08
PTCH1-204ENST00000375290 GAGE12JA6NER3 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 F8VRH5 84 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GAGE7O76087 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 CD7P09564 240 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GAGE12FP0CL80 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GAGE12GP0CL81 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GAGE12IP0CL82 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GAGE4Q13068 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GGNQ86UU5 652 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 C1orf147Q96MC9 270 aaPredicted RBP8.33□□□□□ -1.08
PTCH1-204ENST00000375290 INTS1Q8N201 2190 aaKnown RBP8.33□□□□□ -1.08
PTCH1-204ENST00000375290 TCF20Q9UGU0 1960 aaKnown RBP8.33□□□□□ -1.08
PTCH1-204ENST00000375290 J3KRW8 73 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 TRPT1Q86TN4 253 aaKnown RBP8.33□□□□□ -1.08
PTCH1-204ENST00000375290 SIGLEC8Q9NYZ4 499 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GNG5P63218 68 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GAGE5Q13069 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 GAGE6Q13070 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 DUX3Q96PT4 197 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 TIMM21Q9BVV7 248 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 C1QTNF4Q9BXJ3 329 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 IGHV1-69DA0A0B4J2H0 117 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 ZNF688P0C7X2 276 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 LINC00311Q8N616 119 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 HELZP42694 1942 aaKnown RBP8.33□□□□□ -1.08
PTCH1-204ENST00000375290 IGHV4-39P01824 125 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 PRO1854Q9UHT4 67 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 APC2O95996 2303 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 IGHV3-72A0A0B4J1Y9 119 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 IGLV3-1P01715 115 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 MNX1P50219 401 aaPredicted RBP8.33□□□□□ -1.08
PTCH1-204ENST00000375290 KLHDC3Q9BQ90 382 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 CRIM1Q9NZV1 1036 aa8.33□□□□□ -1.08
PTCH1-204ENST00000375290 RFPL3SP0C7P2 107 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 HLA-DRB4P13762 266 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 NPFFR1Q9GZQ6 430 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 HLA-DRB4X5D2U9 266 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 DENND4AQ7Z401 1863 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 IGLC7A0M8Q6 106 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 CEND1Q8N111 149 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 IGHV1-8P0DP01 117 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 C9orf153Q5TBE3 101 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 CEP290O15078 2479 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 LILRA1O75019 489 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 IGKV3-15P01624 115 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 SMIM20Q8N5G0 67 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 NTF4P34130 210 aa8.32□□□□□ -1.08
PTCH1-204ENST00000375290 RNASE2P10153 161 aaKnown RBP8.32□□□□□ -1.08
PTCH1-204ENST00000375290 KIF26AQ9ULI4 1882 aaPredicted RBP8.32□□□□□ -1.08
PTCH1-204ENST00000375290 PMS2P5A8MQ11 134 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 FAM216BQ8N7L0 139 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 NDUFA4L2Q9NRX3 87 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 CGB1A6NKQ9 187 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 FCN3O75636 299 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 ZFP36L1Q07352 338 aaKnown RBP8.31□□□□□ -1.08
PTCH1-204ENST00000375290 PTPRZ1P23471 2315 aaPredicted RBP8.31□□□□□ -1.08
PTCH1-204ENST00000375290 CLPSP04118 112 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 CEP250Q9BV73 2442 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 CELA2AP08217 269 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 RPL15P61313 204 aaKnown RBP8.31□□□□□ -1.08
PTCH1-204ENST00000375290 ZNF493Q6ZR52 646 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 TMEM158Q8WZ71 300 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 SPTBN1Q01082 2364 aaKnown RBP8.31□□□□□ -1.08
PTCH1-204ENST00000375290 hDV102S1A0JD36 115 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 RPL32P62910 135 aaKnown RBP8.31□□□□□ -1.08
PTCH1-204ENST00000375290 Q8TCH9 128 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 CHD3Q12873 2000 aaKnown RBP8.31□□□□□ -1.08
PTCH1-204ENST00000375290 SOCS3O14543 225 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 SH2D1AO60880 128 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 MALP21145 153 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 RNASE4P34096 147 aaKnown RBP8.31□□□□□ -1.08
PTCH1-204ENST00000375290 DSCR9P59020 149 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 GTSCR1Q86UQ5 136 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 DOCK8Q8NF50 2099 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 BSPH1Q075Z2 132 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 Q6ZSR3 168 aa8.31□□□□□ -1.08
PTCH1-204ENST00000375290 H3BMG7 143 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 THAP8Q8NA92 274 aa8.3□□□□□ -1.08
PTCH1-204ENST00000375290 DEFB124Q8NES8 71 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms