RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 JMJD8Q96S16 334 aa9.4□□□□□ -0.9
PTCH1-203ENST00000375274 PAX1P15863 534 aa9.4□□□□□ -0.91
PTCH1-203ENST00000375274 TMEM14BQ9NUH8 114 aa9.4□□□□□ -0.91
PTCH1-203ENST00000375274 SIGLEC9Q9Y336 463 aa9.4□□□□□ -0.91
PTCH1-203ENST00000375274 KLF2Q9Y5W3 355 aaPredicted RBP9.4□□□□□ -0.91
PTCH1-203ENST00000375274 TGFAP01135 160 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 EMP1P54849 157 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 GLMPQ8WWB7 406 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 CYSLTR1Q9Y271 337 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 MBD3L4A6NDZ8 208 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 MBD3L3A6NE82 208 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 MBD3L5A6NJ08 208 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 TOMM40O96008 361 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 VDAC2P45880 294 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 ZNF672Q499Z4 452 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 SAMD13Q5VXD3 122 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 MBD3L2Q8NHZ7 208 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 SMPXQ9UHP9 88 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 DENND4CQ5VZ89 1909 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 MED13Q9UHV7 2174 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 SAMD5Q5TGI4 173 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 WDR86Q86TI4 376 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 LYPD6Q86Y78 171 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 ZNF114Q8NC26 417 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 RNF5Q99942 180 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 MCRIP2Q9BUT9 160 aaKnown RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 RPL15P61313 204 aaKnown RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 CENPVQ7Z7K6 275 aaPredicted RBP9.39□□□□□ -0.91
PTCH1-203ENST00000375274 ZNF329Q86UD4 541 aa9.39□□□□□ -0.91
PTCH1-203ENST00000375274 ZNF503-AS2A6NEH8 195 aa9.38□□□□□ -0.91
PTCH1-203ENST00000375274 NPFFO15130 113 aa9.38□□□□□ -0.91
PTCH1-203ENST00000375274 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
PTCH1-203ENST00000375274 MRPS16Q9Y3D3 137 aaKnown RBP9.38□□□□□ -0.91
PTCH1-203ENST00000375274 CD7P09564 240 aa9.38□□□□□ -0.91
PTCH1-203ENST00000375274 FXYD7P58549 80 aa9.38□□□□□ -0.91
PTCH1-203ENST00000375274 BCL6BQ8N143 479 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-203ENST00000375274 RIPPLY3P57055 190 aa9.38□□□□□ -0.91
PTCH1-203ENST00000375274 A0A1W2PPI3 338 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 C15orf32Q32M92 178 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 ZNF474Q6S9Z5 364 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-203ENST00000375274 LYPD1Q8N2G4 141 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 ZNRD1Q9P1U0 126 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 ZNF815PA8K554 130 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 Q6ZWC4 215 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 GTSCR1Q86UQ5 136 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 Q8TAT8 98 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 NCOA6Q14686 2063 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-203ENST00000375274 DNAL4O96015 105 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 PSG3Q16557 428 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 Q6ZR03 302 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 Q8NFD4 153 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 ZGRF1Q86YA3 2104 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 IGKV3OR2-268A0A0C4DH90 116 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 GGTLC3B5MD39 225 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 SCGB1A1P11684 91 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 C7orf69Q9H7B7 122 aa9.37□□□□□ -0.91
PTCH1-203ENST00000375274 HOXA3O43365 443 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-203ENST00000375274 IGLC2P0DOY2 106 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 AMN1Q8IY45 258 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 VCX2Q9H322 139 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
PTCH1-203ENST00000375274 C5orf64Q2M2E5 130 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 Q86TA4 180 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 COX11Q9Y6N1 276 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 LY6G6EA0A0G2JKS1 128 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 TPTE2P1Q5T6R2 138 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 SLC25A2Q9BXI2 301 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 U3KQA8 63 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 V9GYV3 84 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 THBDP07204 575 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 ARMS2P0C7Q2 107 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 IFI27P40305 119 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-203ENST00000375274 PAX8Q06710 450 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 LAGE3Q14657 143 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 SSC4DQ8WTU2 575 aa9.36□□□□□ -0.91
PTCH1-203ENST00000375274 CD5LO43866 347 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 SH2D1AO60880 128 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 ZC2HC1BQ5TFG8 222 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 FAM168AQ92567 244 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 LINC00527Q9UJ94 153 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 FREM1Q5H8C1 2179 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 BUB1B-PAK6H3BSN5 160 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 CD300EQ496F6 205 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-203ENST00000375274 LYPD2Q6UXB3 125 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 NUP37Q8NFH4 326 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 SIGMAR1Q99720 223 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 MOB4Q9Y3A3 225 aa9.35□□□□□ -0.91
PTCH1-203ENST00000375274 GAGE13Q4V321 117 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 CCL19Q99731 98 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 GFRA4Q9GZZ7 299 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 NDUFA4L2Q9NRX3 87 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 PLA2G2EQ9NZK7 142 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 GAGE12BA1L429 117 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 SRSF6Q13247 344 aaKnown RBP9.34□□□□□ -0.91
PTCH1-203ENST00000375274 C11orf52Q96A22 123 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 DUX3Q96PT4 197 aa9.34□□□□□ -0.91
PTCH1-203ENST00000375274 PTPRQQ9UMZ3 2332 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms