RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 PCSK4Q6UW60 755 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 C15orf53Q8NAA6 179 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 RNF126Q9BV68 326 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 SCRT2Q9NQ03 307 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 CMC2Q9NRP2 79 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 J3QT63 122 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 PRYO14603 147 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 JTBO76095 146 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 FXYD6P3P58550 94 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 HBG2P69892 147 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 SPEM2Q0P670 501 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 ICAM4Q14773 271 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 COX8CQ7Z4L0 72 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 C17orf82Q86X59 251 aaPredicted RBP6.26□□□□□ -1.41
USP48-203ENST00000374732 OR9G1Q8NH87 305 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 DCANP1Q8TF63 244 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 PATE1Q8WXA2 126 aa6.26□□□□□ -1.41
USP48-203ENST00000374732 COX7CP15954 63 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 IL3RAP26951 378 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 PSMB8P28062 276 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 CCL20P78556 96 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 ZNF322Q6U7Q0 402 aaPredicted RBP6.25□□□□□ -1.41
USP48-203ENST00000374732 ZAR1Q86SH2 424 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 FGFBP3Q8TAT2 258 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 PLEKHA3Q9HB20 300 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 SCN3AQ9NY46 2000 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 COL5A1P20908 1838 aaPredicted RBP6.25□□□□□ -1.41
USP48-203ENST00000374732 NDUFB2O95178 105 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 KCTD18Q6PI47 426 aaPredicted RBP6.25□□□□□ -1.41
USP48-203ENST00000374732 AQP10Q96PS8 301 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 NMNAT3Q96T66 252 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 FAM60AQ9NP50 221 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 PHF3Q92576 2039 aaKnown RBP6.25□□□□□ -1.41
USP48-203ENST00000374732 A0A1B0GXF2 115 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 ZNF736B4DX44 427 aaPredicted RBP6.25□□□□□ -1.41
USP48-203ENST00000374732 FOXS1O43638 330 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 SS18Q15532 418 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 Q6ZS92 163 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 KCNS1Q96KK3 526 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 CKLFQ9UBR5 152 aa6.25□□□□□ -1.41
USP48-203ENST00000374732 KLF13Q9Y2Y9 288 aaPredicted RBP6.25□□□□□ -1.41
USP48-203ENST00000374732 MDFIC2A0A1B0GVS7 189 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 RFPL3SP0C7P2 107 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 EGR2P11161 476 aaPredicted RBP6.24□□□□□ -1.41
USP48-203ENST00000374732 HLA-DRB4P13762 266 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 INSL4Q14641 139 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 HLA-DQA1Q5Y7H0 255 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 LINC00305Q7Z4B0 112 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 WDR86Q86TI4 376 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 MDFIQ99750 246 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 HLA-DRB4X5D2U9 266 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 ARHGEF17Q96PE2 2063 aaPredicted RBP6.24□□□□□ -1.41
USP48-203ENST00000374732 A0A1B0GWA3 101 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 A0A1W2PS18 150 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 LYRM9A8MSI8 78 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 SYNGR2O43760 224 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 NCR2O95944 276 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 COX6A1P12074 109 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 FHL1Q13642 323 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 LAGE3Q14657 143 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 RUSC1-AS1Q66K80 236 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 TEN1Q86WV5 123 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 CEND1Q8N111 149 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 PFN4Q8NHR9 129 aa6.24□□□□□ -1.41
USP48-203ENST00000374732 TRAV12-2A0A075B6T6 113 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 IGHV1OR15-9A0A0B4J2B8 117 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 H0YIZ8 118 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 TECTAO75443 2155 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 SCRG1O75711 98 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 ZNF883P0CG24 379 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 FAM19A2Q8N3H0 131 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 NEXN-AS1Q8NBZ9 246 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 TRAV8-2A0A0B4J237 113 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 SNRPD3P62318 126 aaKnown RBP6.23□□□□□ -1.41
USP48-203ENST00000374732 TMEM99Q8N816 258 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 OVOL2Q9BRP0 275 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 C19orf25Q9UFG5 118 aaPredicted RBP6.23□□□□□ -1.41
USP48-203ENST00000374732 DIDO1Q9BTC0 2240 aaKnown RBP6.23□□□□□ -1.41
USP48-203ENST00000374732 PLXNB1O43157 2135 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 TRGV11A0A075B6L2 103 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 E9PLD3 99 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 C11orf98E9PRG8 122 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 K7N7A8 449 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 CD59P13987 128 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 TMEM187Q14656 261 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 PRR15Q8IV56 129 aa6.23□□□□□ -1.41
USP48-203ENST00000374732 INS-IGF2F8WCM5 200 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 H3BT86 120 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 LGALS9O00182 355 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 CLPSP04118 112 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 SMCPP49901 116 aaPredicted RBP6.22□□□□□ -1.41
USP48-203ENST00000374732 BEAN1Q3B7T3 259 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 C19orf54Q5BKX5 351 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 ZNF324BQ6AW86 544 aaPredicted RBP6.22□□□□□ -1.41
USP48-203ENST00000374732 OR52N5Q8NH56 324 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 CYSTM1Q9H1C7 97 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 DPH3P1Q9H4G8 78 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 OCIAD1Q9NX40 245 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 P0DMU3 169 aa6.22□□□□□ -1.41
USP48-203ENST00000374732 FAM231AP0DMU4 169 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms