RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 RPL36ALQ969Q0 106 aaKnown RBP11.73□□□□□ -0.53
TRAF1-201ENST00000373887 B4DSR2 109 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 TMEM178BH3BS89 294 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 C5orf24Q7Z6I8 188 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 MBNL3Q9NUK0 354 aaKnown RBP11.73□□□□□ -0.53
TRAF1-201ENST00000373887 SH2D1AO60880 128 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 MAJINQ3KP22 176 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 Q96MF0 132 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 SPXQ9BT56 116 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 RPUSD1Q9UJJ7 312 aaKnown RBP11.73□□□□□ -0.53
TRAF1-201ENST00000373887 RUSC1-AS1Q66K80 236 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 Q6ZS92 163 aa11.73□□□□□ -0.53
TRAF1-201ENST00000373887 A0A087WWL8 130 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 C5orf63A6NC05 138 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 VWA8A3KMH1 1905 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 UBE2CO00762 179 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 LCN12Q6JVE5 192 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 HEPN1Q6WQI6 88 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 C3orf56Q8N813 242 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 SLC25A39Q9BZJ4 359 aaPredicted RBP11.72□□□□□ -0.53
TRAF1-201ENST00000373887 IGFBP3P17936 291 aaPredicted RBP11.72□□□□□ -0.53
TRAF1-201ENST00000373887 LYPD2Q6UXB3 125 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 CNOT1A5YKK6 2376 aaKnown RBP11.72□□□□□ -0.53
TRAF1-201ENST00000373887 TNFSF13O75888 250 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 AMBPP02760 352 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 PRB1P04280 392 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 DUTP33316 252 aaKnown RBP11.72□□□□□ -0.53
TRAF1-201ENST00000373887 C14orf178Q8N769 122 aaPredicted RBP11.72□□□□□ -0.53
TRAF1-201ENST00000373887 DLX4Q92988 240 aaPredicted RBP11.72□□□□□ -0.53
TRAF1-201ENST00000373887 ZNF124Q15973 351 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
TRAF1-201ENST00000373887 CD177Q8N6Q3 437 aa11.71□□□□□ -0.53
TRAF1-201ENST00000373887 SMPXQ9UHP9 88 aa11.71□□□□□ -0.53
TRAF1-201ENST00000373887 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.53
TRAF1-201ENST00000373887 A0A0A6YYD4 124 aa11.71□□□□□ -0.53
TRAF1-201ENST00000373887 NABP1Q96AH0 204 aa11.71□□□□□ -0.53
TRAF1-201ENST00000373887 ZNF138P52744 262 aa11.71□□□□□ -0.53
TRAF1-201ENST00000373887 PSG1P11464 419 aa11.71□□□□□ -0.54
TRAF1-201ENST00000373887 H0YIZ8 118 aa11.71□□□□□ -0.54
TRAF1-201ENST00000373887 J3QKU1 62 aa11.71□□□□□ -0.54
TRAF1-201ENST00000373887 C9JAW5 83 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 RBMY1FQ15415 496 aaKnown RBP11.7□□□□□ -0.54
TRAF1-201ENST00000373887 TREML4Q6UXN2 200 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 TMEM158Q8WZ71 300 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 BTCP35070 178 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 CACNA1BQ00975 2339 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 ALPK2Q86TB3 2170 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 SPINK8P0C7L1 97 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 IGHV1-8P0DP01 117 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 IGKV1D-8A0A087WSZ0 117 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 IGKV1-12A0A0C4DH73 117 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 IGKV1D-12P01611 117 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 LY6G6FQ5SQ64 297 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 IL17RELQ6ZVW7 336 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 COL6A6A6NMZ7 2263 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 KIR3DS1Q14943 382 aa11.7□□□□□ -0.54
TRAF1-201ENST00000373887 CRYGSP22914 178 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 KLF17Q5JT82 389 aaPredicted RBP11.69□□□□□ -0.54
TRAF1-201ENST00000373887 PRIMA1Q86XR5 153 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 DOCK8Q8NF50 2099 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 F8VVB4 439 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 F8VWA3 439 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 ESPL1Q14674 2120 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 E7EQL1 145 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 DEFB130BP0DP73 79 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 DEFB130AP0DP74 79 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 CFHR3Q02985 330 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 KLHL30-AS1Q8NEE0 82 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 RFNGQ9Y644 331 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 IGKV1-27A0A075B6S5 117 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 HOXD3P31249 432 aaPredicted RBP11.69□□□□□ -0.54
TRAF1-201ENST00000373887 HGFACQ04756 655 aa11.69□□□□□ -0.54
TRAF1-201ENST00000373887 PSG3Q16557 428 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 MPV17L2Q567V2 206 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 LINC01356Q8N9X3 169 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 MBD3L4A6NDZ8 208 aaPredicted RBP11.68□□□□□ -0.54
TRAF1-201ENST00000373887 MBD3L3A6NE82 208 aaPredicted RBP11.68□□□□□ -0.54
TRAF1-201ENST00000373887 MBD3L5A6NJ08 208 aaPredicted RBP11.68□□□□□ -0.54
TRAF1-201ENST00000373887 MBD3L2Q8NHZ7 208 aaPredicted RBP11.68□□□□□ -0.54
TRAF1-201ENST00000373887 DNAJC30Q96LL9 226 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 PSPNO60542 156 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 SS18Q15532 418 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 ADAMTSL5Q6ZMM2 481 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 TMEM256Q8N2U0 113 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 NUP35Q8NFH5 326 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 SNHG12Q9BXW3 62 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 NCOR1O75376 2440 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 TRAV3A0A0B4J244 114 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 IGHV1-3A0A0C4DH29 117 aa11.68□□□□□ -0.54
TRAF1-201ENST00000373887 VCYO14598 125 aa11.67□□□□□ -0.54
TRAF1-201ENST00000373887 GAS1P54826 345 aa11.67□□□□□ -0.54
TRAF1-201ENST00000373887 SLC25A48Q6ZT89 311 aaKnown RBP11.67□□□□□ -0.54
TRAF1-201ENST00000373887 CITED1Q99966 193 aa11.67□□□□□ -0.54
TRAF1-201ENST00000373887 INTS1Q8N201 2190 aaKnown RBP11.67□□□□□ -0.54
TRAF1-201ENST00000373887 MYMXA0A1B0GTQ4 84 aa11.67□□□□□ -0.54
TRAF1-201ENST00000373887 B3GALT5-AS1P59052 145 aa11.67□□□□□ -0.54
TRAF1-201ENST00000373887 C9orf153Q5TBE3 101 aa11.67□□□□□ -0.54
TRAF1-201ENST00000373887 TMEM126AQ9H061 195 aa11.67□□□□□ -0.54
TRAF1-201ENST00000373887 POLEQ07864 2286 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms